Evidence map›Paper›PMID 34994586›Full record

ArticleCirculation2022

Common Ancestry-Specific Ion Channel Variants Predispose to Drug-Induced Arrhythmias.

Yuko Wada, Tao Yang, Christian M Shaffer, Laura L Daniel, Andrew M Glazer, Giovanni E Davogustto, Brandon D Lowery, Eric H Farber-Eger, Quinn S Wells, Dan M Roden

Open access · bronzeAbstract read
In one paragraph

Article in Circulation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  8. Article
  9. Stem cell models of inherited arrhythmias.Nature cardiovascular research · 2024
    Review
  10. Article
  11. Cardiovascular precision medicine - A pharmacogenomic perspective.Cambridge prisms. Precision medicine · 2023
    Review
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Tao YangDepartment of Medicine (Y.W., T.Y., C.M.S., L.L.D., A.M.G., G.E.D.), Vanderbilt University Medical Center, Nashville, TN.
Christian M ShafferDepartment of Medicine (Y.W., T.Y., C.M.S., L.L.D., A.M.G., G.E.D.), Vanderbilt University Medical Center, Nashville, TN.
Laura L DanielDepartment of Medicine (Y.W., T.Y., C.M.S., L.L.D., A.M.G., G.E.D.), Vanderbilt University Medical Center, Nashville, TN.
Andrew M GlazerDepartment of Medicine (Y.W., T.Y., C.M.S., L.L.D., A.M.G., G.E.D.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0002-3938-4713
Giovanni E DavogusttoDepartment of Medicine (Y.W., T.Y., C.M.S., L.L.D., A.M.G., G.E.D.), Vanderbilt University Medical Center, Nashville, TN.
Brandon D LoweryVanderbilt Institute for Clinical and Translational Research (B.D.L., E.H.F.-E.), Vanderbilt University Medical Center, Nashville, TN.
Eric H Farber-EgerVanderbilt Institute for Clinical and Translational Research (B.D.L., E.H.F.-E.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0003-0281-3796
Quinn S WellsDepartments of Medicine, Pharmacology, and Biomedical Informatics (Q.S.W., D.M.R.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0003-3899-0313
Dan M RodenDepartments of Medicine, Pharmacology, and Biomedical Informatics (Q.S.W., D.M.R.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0002-6302-0389
Vanderbilt University Medical Center · US

Funding

The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Understanding and preventing HLA-associated drug reactionsP50GM115305 · NIGMS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DENNY, JOSHUA C. · 2015 to 2019
$13.0M
Functional Genomics of Cardiac Sodium Channel VariantsR01HL149826 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RODEN, DAN M · 2020 to 2023
$2.9M
A pipeline for identifying disease-causing variants in transmembrane proteinsK99HG010904 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GLAZER, ANDREW M. · 2020 to 2021
$223k
NCATS NIH HHS UL1 TR000445NHGRI NIH HHS K99 HG010904NHLBI NIH HHS R01 HL149826NIGMS NIH HHS P50 GM115305
6 · The paper itself

Abstract

backgroundMultiple reports associate the cardiac sodium channel gene (

methodsWe determined the effect of S1103Y on QT intervals among African-American participants in a large electronic health record. Using cardiomyocytes derived from induced pluripotent stem cells carrying naturally occurring or genome-edited variants, we studied action potential durations (APDs) at baseline and after challenge with the repolarizing potassium current (

resultsIn 1479 African-American participants with no confounding medications or diagnoses of heart disease, QT intervals in S1103Y carriers was no different from that in noncarriers. Baseline APD was no different in cells expressing the Y allele (SY, YY cells) compared with isogenic cells with the reference allele (SS cells). However,

conclusionsThese common ancestry-specific variants do not affect baseline repolarization, despite generating increased

Indexed as

Arrhythmias, CardiacHumansIon ChannelsIon Channelsdrug-related side effects and adverse reactionsinduced pluripotent stem cellslong QT syndromemyocytes, cardiacpotassium channelssodium channelsTorsades de Pointes

Identifiers

PMID34994586
PMCPMC8852297
OpenAlexW4205265569

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.