Evidence map›Paper›PMID 34993779›Full record

ArticleEnvironmental science and pollution research international2022

Commonly used surfactants sodium dodecyl sulphate, cetylpyridinium chloride and sodium laureth sulphate and their effects on antioxidant defence system and oxidative stress indices in Cyprinus carpio L.: an integrated in silico and in vivo approach.

Ritwick Bhattacharya, Arnab Chatterjee, Soumendranath Chatterjee, Nimai Chandra Saha

Abstract read
PubMed Publisher
In one paragraph

Article in Environmental science and pollution research international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ritwick BhattacharyaFishery and Ecotoxicology Research Laboratory (Vice-Chancellor's Research Group), Department of Zoology, The University of Burdwan, Burdwan, 713104, West Bengal, India.
Arnab ChatterjeeFishery and Ecotoxicology Research Laboratory (Vice-Chancellor's Research Group), Department of Zoology, The University of Burdwan, Burdwan, 713104, West Bengal, India.
Soumendranath ChatterjeeParasitology and Microbiology Research Laboratory, Department of Zoology, The University of Burdwan, Burdwan, West Bengal, India.
Nimai Chandra SahaFishery and Ecotoxicology Research Laboratory (Vice-Chancellor's Research Group), Department of Zoology, The University of Burdwan, Burdwan, 713104, West Bengal, India. research.ncsaha@gmail.com.ORCID http://orcid.org/0000-0003-2610-9242
University of Burdwan · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study evaluated the homology modelling, in silico prediction and characterization of Cyprinus carpio cytochrome P450, as well as molecular docking experiments between the modelled protein and the surfactants sodium dodecyl sulphate (SDS), sodium laureth sulphate (SLES) and cetylpyridinium chloride (CPC). Homology modelling of cytochrome P450 was performed using the best fit template structure. The structure was optimized with 3D refine, and the ultimate 3D structure was checked with PROCHEK and ERRATA. ExPASy's ProtParam was likewise used to analyse the modelled protein's physiochemical and stereochemical attributes. To establish the binding pattern of each ligand to the targeted protein and its effect on the overall protein conformation, molecular docking calculations and protein-ligand interactions were performed. Our in silico analysis revealed that hydrophobic interactions with the active site amino acid residues of cytochrome p450 were more prevalent than hydrogen bonds and salt bridges. The in vivo analysis exhibited that exposure of fish to sublethal concentrations (10% and 30% of 96 h LC

Indexed as

CarpsAnimalsAntioxidantsBiomarkersCetylpyridiniumCytochrome P-450 Enzyme SystemLigandsMolecular Docking SimulationOxidative StressSodium Dodecyl SulfateSurface-Active AgentsAntioxidantsBiomarkersCetylpyridiniumCytochrome P-450 Enzyme SystemLigandsSodium Dodecyl Sulfatesodium laureth sulfateSurface-Active AgentsCyprinus carpioCytochrome P450Homology modellingMolecular dockingOxidative stress

Identifiers

PMID34993779
OpenAlexW4206473234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.