Evidence map›Paper›PMID 34993263›Full record

ArticleAmerican journal of clinical and experimental urology2021

Patient derived models of bladder cancer enrich the signal of the tumor cell transcriptome facilitating the analysis of the tumor cell compartment.

Michalis Mastri, Swathi Ramakrishnan, Shruti D Shah, Ellen Karasik, Bryan M Gillard, Michael T Moser, Bailey K Farmer, Gissou Azabdaftari, Gurkamal S Chatta, Anna Woloszynska and 3 more

Open access · greenAbstract read
In one paragraph

Article in American journal of clinical and experimental urology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. The role of organoids in cancer research.Experimental hematology & oncology · 2023
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Michalis MastriDepartment of Cancer Genetics and Genomics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Swathi RamakrishnanDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Shruti D ShahDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Ellen KarasikDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Bryan M GillardDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Michael T MoserDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Bailey K FarmerDepartment of Medicine, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Gissou AzabdaftariDepartment of Pathology, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Gurkamal S ChattaDepartment of Medicine, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Anna WoloszynskaDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Kevin H EngDepartment of Cancer Genetics and Genomics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Barbara A FosterDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Wendy J HussDepartment of Cell Stress Biology, Roswell Park Comprehensive Cancer Center Buffalo 14263, NY, USA.
Roswell Park Comprehensive Cancer Center · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
NCI NIH HHS P30 CA016056
6 · The paper itself

Abstract

The evolving paradigm of the molecular classification of bladder cancer requires models that represent the classifications with less heterogeneity. Robust transcriptome based molecular classifications are essential to address tumor heterogeneity. Patient derived models (PDMs) are a powerful preclinical tool to study specific tumor compartments. We tested if the consensus molecular subtype analysis was applicable to PDMs and evaluated the tumor compartment each model represents. PDMs derived from surgical specimens were established as xenografts (PDX), organoids (PDO), and spheroids (PDS). The surgical specimens and PDMs were molecularly characterized by RNA sequencing. PDMs that were established in immune deficient mice or

Indexed as

Bladder cancerepithelial to mesenchymal transition (EMT)organoidpatient derived modelsspheroidxenograft

Identifiers

PMID34993263
PMCPMC8727788
OpenAlexW4206888178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.