Evidence map›Paper›PMID 34992297›Full record

ArticleNature metabolism2022

Oxidative ornithine metabolism supports non-inflammatory C. difficile colonization.

Kali M Pruss, Fatima Enam, Eric Battaglioli, Mary DeFeo, Oscar R Diaz, Steven K Higginbottom, Curt R Fischer, Andrew J Hryckowian, William Van Treuren, Dylan Dodd and 2 more

Abstract read
In one paragraph

Article in Nature metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Clostridioides difficile pathogenesis and control.Nature reviews. Microbiology · 2026
    Review
  6. Article
  7. Review
  8. The emerging view on the roles of butyrate inInfection and immunity · 2025
    Review
  9. Unravelling three-way interactions betweenJournal of medical microbiology · 2025
    Review
  10. A regulator of amino acid catabolism controlsbioRxiv : the preprint server for biology · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kali M PrussDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-8619-5886
Fatima EnamDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-8812-2026
Eric BattaglioliDepartment of Medicine, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Mary DeFeoDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-7689-9655
Oscar R DiazDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0003-4041-2096
Steven K HigginbottomDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.
Curt R FischerChEM-H, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0003-3386-9813
Andrew J HryckowianDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-8956-6259
William Van TreurenDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.
Dylan DoddDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-6210-6239
Purna KashyapDepartment of Medicine, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Justin L SonnenburgDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA. jsonnenburg@stanford.edu.ORCID http://orcid.org/0000-0003-2299-6817

Funding

MOLECULAR BASIS OF HOST-PARASITE INTERACTIONT32AI007328 · NIAID · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 1987 to 2026
$11.9M
Impact of Diet on Intestinal Microbiota-Host DynamicsR01DK085025 · NIDDK · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 2010 to 2026
$6.4M
Mechanisms of persistent Salmonella infectionR01AI116059 · NIAID · STANFORD UNIVERSITY · PI MONACK, DENISE M · 2015 to 2025
$4.6M
Modulation of gut bacteria-derived host metabolitesK08DK110335 · NIDDK · STANFORD UNIVERSITY · PI DODD, DYLAN · 2018 to 2021
$573k
NIAID NIH HHS R01 AI116059NIAID NIH HHS T32 AI007328NIDDK NIH HHS K08 DK110335NIDDK NIH HHS R01 DK085025
6 · The paper itself

Abstract

The enteric pathogen Clostridioides difficile (Cd) is responsible for a toxin-mediated infection that causes more than 200,000 recorded hospitalizations and 13,000 deaths in the United States every year

Indexed as

Host-Pathogen InteractionsOxidation-ReductionAmino AcidsAnimalsClostridioides difficileClostridium InfectionsEnergy MetabolismGastrointestinal MicrobiomeHumansMetabolic Networks and PathwaysMetabolomeMetabolomicsMiceNitric Oxide SynthaseOrnithineOxidative StressAmino AcidsNitric Oxide SynthaseOrnithine

Identifiers

PMID34992297
PMCPMC8803604

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.