Evidence map›Paper›PMID 34991507›Full record

ArticleBMC infectious diseases2022

Clinical sign and biomarker-based algorithm to identify bacterial pneumonia among outpatients with lower respiratory tract infection in Tanzania.

Sarika K L Hogendoorn, Loïc Lhopitallier, Melissa Richard-Greenblatt, Estelle Tenisch, Zainab Mbarack, Josephine Samaka, Tarsis Mlaganile, Aline Mamin, Blaise Genton, Laurent Kaiser and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Sarika K L HogendoornInfectious Diseases Service, University Hospital and University of Lausanne, Lausanne, Switzerland. sarika.hogendoorn@gmail.com.
Loïc LhopitallierInfectious Diseases Service, University Hospital and University of Lausanne, Lausanne, Switzerland.
Melissa Richard-GreenblattTropical Disease Unit, Department of Medicine, Sandra Rotman Centre for Global Health, University Health Network-Toronto General Hospital, University of Toronto, Toronto, Canada.
Estelle TenischDepartment of Radiology, University Hospital and University of Lausanne, Lausanne, Switzerland.
Zainab MbarackMwananyamala Hospital, Dar es Salaam, United Republic of Tanzania.
Josephine SamakaIfakara Health Institute, Dar es Salaam, United Republic of Tanzania.
Tarsis MlaganileIfakara Health Institute, Dar es Salaam, United Republic of Tanzania.
Aline MaminDivision of Infectious Diseases and Center for Emerging Viral Diseases, University of Geneva Hospitals, and Faculty of Medicine, Geneva, Switzerland.
Blaise GentonCenter for Primary Care and Public Health, University of Lausanne, Lausanne, Switzerland.
Laurent KaiserDivision of Infectious Diseases and Center for Emerging Viral Diseases, University of Geneva Hospitals, and Faculty of Medicine, Geneva, Switzerland.
Valérie D'AcremontCenter for Primary Care and Public Health, University of Lausanne, Lausanne, Switzerland.
Kevin C Kain *Tropical Disease Unit, Department of Medicine, Sandra Rotman Centre for Global Health, University Health Network-Toronto General Hospital, University of Toronto, Toronto, Canada.
Noémie Boillat-Blanco *Infectious Diseases Service, University Hospital and University of Lausanne, Lausanne, Switzerland.
University of Lausanne · CHIfakara Health Institute · TZUniversity of Basel · CHUniversity of Geneva · CHToronto General Hospital · CAUniversity of Toronto · CA

Funding

Bill and Melinda Gates Foundation OPP-1022128Canadian Institutes of Health Research,Canada FDN-148439Fondation Leenaards postdoctoral fellowship
6 · The paper itself

Abstract

backgroundInappropriate antibiotics use in lower respiratory tract infections (LRTI) is a major contributor to resistance. We aimed to design an algorithm based on clinical signs and host biomarkers to identify bacterial community-acquired pneumonia (CAP) among patients with LRTI.

methodsParticipants with LRTI were selected in a prospective cohort of febrile (≥ 38 °C) adults presenting to outpatient clinics in Dar es Salaam. Participants underwent chest X-ray, multiplex PCR for respiratory pathogens, and measurements of 13 biomarkers. We evaluated the predictive accuracy of clinical signs and biomarkers using logistic regression and classification and regression tree analysis.

resultsOf 110 patients with LRTI, 17 had bacterial CAP. Procalcitonin (PCT), interleukin-6 (IL-6) and soluble triggering receptor expressed by myeloid cells-1 (sTREM-1) showed an excellent predictive accuracy to identify bacterial CAP (AUROC 0.88, 95%CI 0.78-0.98; 0.84, 0.72-0.99; 0.83, 0.74-0.92, respectively). Combining respiratory rate with PCT or IL-6 significantly improved the model compared to respiratory rate alone (p = 0.006, p = 0.033, respectively). An algorithm with respiratory rate (≥ 32/min) and PCT (≥ 0.25 μg/L) had 94% sensitivity and 82% specificity.

conclusionsPCT, IL-6 and sTREM-1 had an excellent predictive accuracy in differentiating bacterial CAP from other LRTIs. An algorithm combining respiratory rate and PCT displayed even better performance in this sub-Sahara African setting.

Indexed as

Pneumonia, BacterialRespiratory Tract InfectionsAlgorithmsBiomarkersC-Reactive ProteinHumansOutpatientsProspective StudiesTanzaniaBiomarkersC-Reactive ProteinBacterial community-acquired pneumoniaBiomarkersPCTPredicting algorithm

Identifiers

PMID34991507
PMCPMC8735728
OpenAlexW4225311307

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.