Evidence map›Paper›PMID 34988256›Full record

ArticleOpen forum infectious diseases2022

Statewide Longitudinal Trends in Transmitted HIV-1 Drug Resistance in Rhode Island, USA.

Vlad Novitsky, Jon Steingrimsson, Fizza S Gillani, Mark Howison, Su Aung, Matthew Solomon, Cindy Y Won, Amy Brotherton, Rajeev Shah, Casey Dunn and 10 more

Open access · goldAbstract read
In one paragraph

Article in Open forum infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 1 country.

Vlad NovitskyBrown University, Providence, Rhode Island, USA.
Jon SteingrimssonBrown University, Providence, Rhode Island, USA.
Fizza S GillaniBrown University, Providence, Rhode Island, USA.
Mark HowisonResearch Improving People's Life, Providence, Rhode Island, USA.
Su AungBrown University, Providence, Rhode Island, USA.
Matthew SolomonBrown University, Providence, Rhode Island, USA.
Cindy Y WonBrown University, Providence, Rhode Island, USA.
Amy BrothertonBrown University, Providence, Rhode Island, USA.
Rajeev ShahBrown University, Providence, Rhode Island, USA.
Casey DunnYale University, New Haven, Connecticut, USA.
John FultonBrown University, Providence, Rhode Island, USA.
Thomas BertrandRhode Island Department of Health, Providence, Rhode Island, USA.
Anna CivitareseRhode Island Department of Health, Providence, Rhode Island, USA.
Katharine HoweRhode Island Department of Health, Providence, Rhode Island, USA.
Theodore MarakRhode Island Department of Health, Providence, Rhode Island, USA.
Philip ChanBrown University, Providence, Rhode Island, USA.
Utpala BandyRhode Island Department of Health, Providence, Rhode Island, USA.
Nicole Alexander-ScottRhode Island Department of Health, Providence, Rhode Island, USA.
Joseph HoganBrown University, Providence, Rhode Island, USA.
Rami KantorBrown University, Providence, Rhode Island, USA.
Brown University · USRhode Island Department of Health · USProvidence College · USYale University · US

Funding

Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI CURT G BECKWITH · 1998 to 2026
$51.7M
Real Time Phylogeny and Contact Tracing to Disrupt HIV TransmissionR01AI136058 · NIAID · MIRIAM HOSPITAL · PI KANTOR, RAMI · 2018 to 2022
$3.4M
HIV Drug Resistance, Monitoring and TransmissionK24AI134359 · NIAID · MIRIAM HOSPITAL · PI Rami Kantor · 2018 to 2026
$1.3M
NIAID NIH HHS K24 AI134359NIAID NIH HHS P30 AI042853NIAID NIH HHS R01 AI136058
6 · The paper itself

Abstract

backgroundHIV-1 transmitted drug resistance (TDR) remains a global challenge that can impact care, yet its comprehensive assessment is limited and heterogenous. We longitudinally characterized statewide TDR in Rhode Island.

methodsDemographic and clinical data from treatment-naïve individuals were linked to protease, reverse transcriptase, and integrase sequences routinely obtained over 2004-2020. TDR extent, trends, impact on first-line regimens, and association with transmission networks were assessed using the Stanford Database, Mann-Kendall statistic, and phylogenetic tools.

resultsIn 1123 individuals, TDR to any antiretroviral increased from 8% (2004) to 26% (2020), driven by non-nucleotide reverse transcriptase inhibitor (NNRTI; 5%-18%) and, to a lesser extent, nucleotide reverse transcriptase inhibitor (NRTI; 2%-8%) TDR. Dual- and triple-class TDR rates were low, and major integrase strand transfer inhibitor resistance was absent. Predicted intermediate to high resistance was in 77% of those with TDR, with differential suppression patterns. Among all individuals, 34% were in molecular clusters, some only with members with TDR who shared mutations. Among clustered individuals, people with TDR were more likely in small clusters.

conclusionsIn a unique (statewide) assessment over 2004-2020, TDR increased; this was primarily, but not solely, driven by NNRTIs, impacting antiretroviral regimens. Limited TDR to multiclass regimens and pre-exposure prophylaxis are encouraging; however, surveillance and its integration with molecular epidemiology should continue in order to potentially improve care and prevention interventions.

Indexed as

HIV-1 drug resistancelongitudinal trendssurveillancetransmission networkstransmitted drug resistance

Identifiers

PMID34988256
PMCPMC8709897
OpenAlexW4200128802

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.