Evidence map›Paper›PMID 34986196›Full record

ArticlePloS one2022

Evolution of pneumococcal serotype epidemiology in Botswana following introduction of 13-valent pneumococcal conjugate vaccine.

Sweta M Patel, Yazdani B Shaik-Dasthagirisaheb, Morgan Congdon, Rebecca R Young, Mohamed Z Patel, Tiny Mazhani, Sefelani Boiditswe, Tirayaone Leburu, Kwana Lechiile, Tonya Arscott-Mills and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Sweta M PatelDivision of Pulmonary, Allergy and Critical Care Medicine, Duke University, Durham, NC, United States of America.ORCID 0000-0001-7867-7706
Yazdani B Shaik-DasthagirisahebDivision of Pediatric Infectious Diseases, Boston University School of Medicine, Boston, MA, United States of America.
Morgan CongdonDivision of General Pediatrics, Children's Hospital of Philadelphia, Philadelphia, PA, United States of America.
Rebecca R YoungDivision of Pediatric Infectious Diseases, Duke University, Durham, NC, United States of America.ORCID 0000-0002-5694-5308
Mohamed Z PatelDepartment of Paediatric and Adolescent Health, Faculty of Medicine, University of Botswana, Gaborone, Botswana.
Tiny MazhaniDepartment of Paediatric and Adolescent Health, Faculty of Medicine, University of Botswana, Gaborone, Botswana.
Sefelani BoiditsweBotswana-University of Pennsylvania Partnership, Gaborone, Botswana.
Tirayaone LeburuBotswana-University of Pennsylvania Partnership, Gaborone, Botswana.
Kwana LechiileBotswana-University of Pennsylvania Partnership, Gaborone, Botswana.
Tonya Arscott-MillsDivision of General Pediatrics, Children's Hospital of Philadelphia, Philadelphia, PA, United States of America.
Andrew P SteenhoffDivision of General Pediatrics, Children's Hospital of Philadelphia, Philadelphia, PA, United States of America.
Kristen A FeemsterDivision of Pediatric Infectious Diseases and Global Health Center, Department of Pediatrics, Children's Hospital of Philadelphia, Philadelphia, PA, United States of America.
Samir S ShahDivisions of Hospital Medicine and Infectious Diseases, Cincinnati Children's Medical Center, Cincinnati, OH, United States of America.
Coleen K CunninghamDepartment of Pediatrics, University of California, Irvine, Irvine, CA, United States of America.
Stephen I PeltonDivision of Pediatric Infectious Diseases, Boston University School of Medicine, Boston, MA, United States of America.
Matthew S KellyDuke Global Health Institute, Duke University, Durham, NC, United States of America.
University of Botswana · BWChildren's Hospital of Philadelphia · USDuke University · USBoston University · USCincinnati Children's Hospital Medical Center · USUniversity of California, Irvine · US

Funding

Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DAVID S METZGER · 1999 to 2026
$78.6M
Social and Behavioral Sciences CoreP30AI064518 · NIAID · DUKE UNIVERSITY · PI GEORGIA Doris TOMARAS · 2005 to 2026
$50.5M
Vanderbilt-Emory-Cornell-Duke Global Health Fellowship Consortium-Expanding Diversity for Global Equity (EDGE)D43TW009337 · FIC · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALIYU, MUKTAR HASSAN, HEIMBURGER, DOUGLAS CORBETT · 2017 to 2021
$6.3M
Nasopharyngeal Microbiome and Risk of Bacterial Pathogen Colonization in InfantsK23AI135090 · NIAID · DUKE UNIVERSITY · PI KELLY, MATTHEW SCOTT · 2018 to 2022
$860k
FIC NIH HHS D43 TW009337NIAID NIH HHS K23 AI135090NIAID NIH HHS P30 AI045008NIAID NIH HHS P30 AI064518Wellcome Trust
6 · The paper itself

Abstract

Pneumococcal conjugate vaccines reduce the burden of invasive pneumococcal disease, but the sustained effect of these vaccines can be diminished by an increase in disease caused by non-vaccine serotypes. To describe pneumococcal serotype epidemiology in Botswana following introduction of 13-valent pneumococcal conjugate vaccine (PCV-13) in July 2012, we performed molecular serotyping of 268 pneumococcal strains isolated from 221 children between 2012 and 2017. The median (interquartile range) age of the children included in this analysis was 6 (3,12) months. Fifty-nine percent of the children had received at least one dose of PCV-13 and 35% were fully vaccinated with PCV-13. While colonization by vaccine serotypes steadily declined following PCV-13 introduction, 25% of strains isolated more than 3 years after vaccine introduction were PCV-13 serotypes. We also observed an increase in colonization by non-vaccine serotypes 21 and 23B, which have been associated with invasive pneumococcal disease and antibiotic resistance in other settings.

Indexed as

Bacterial Typing TechniquesBotswanaFemaleHumansInfantMaleNasopharynxPhylogenyPneumococcal InfectionsPneumococcal VaccinesPopulation SurveillanceSerotypingStreptococcus pneumoniae13-valent pneumococcal vaccinePneumococcal Vaccines

Identifiers

PMID34986196
PMCPMC8730465
OpenAlexW4205862702

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.