Evidence map›Paper›PMID 34985706›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2022

Drosophila Unfolded Protein Response (UPR) Assays In Vitro and In Vivo.

Hidetaka Katow, Deepika Vasudevan, Hyung Don Ryoo

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Hidetaka KatowDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY, USA.
Deepika VasudevanDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY, USA.
Hyung Don RyooDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY, USA. hyungdon.ryoo@nyumc.org.
New York University · US

Funding

Unfolded Protein Response in Eye Development and DiseaseR01EY020866 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HYUNG D RYOO · 2010 to 2026
$6.9M
Translation control of stress response and innate immunityR01GM125954 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RYOO, HYUNG D · 2018 to 2021
$1.4M
ER stress-induced translational regulation in retinal degenerationR00EY029013 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VASUDEVAN, DEEPIKA · 2021 to 2023
$724k
ER stress-induced translational regulation in retinal degenerationK99EY029013 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI VASUDEVAN, DEEPIKA · 2018 to 2020
$254k
NEI NIH HHS K99 EY029013NEI NIH HHS R00 EY029013NEI NIH HHS R01 EY020866NIGMS NIH HHS R01 GM125954
6 · The paper itself

Abstract

Wildtype or mutant proteins expressed beyond the capacity of a cell's protein folding system could be detrimental to general cellular function and survival. In response to misfolded protein overload in the endoplasmic reticulum (ER), eukaryotic cells activate the Unfolded Protein Response (UPR) that helps cells restore protein homeostasis in the endoplasmic reticulum (ER). As part of the UPR, cells attenuate general mRNA translation and activate transcription factors that induce stress-responsive gene expression.UPR signaling draws research interest in part because conditions that cause chronic protein misfolding in the ER or those that impair UPR signaling underlie several diseases including neurodegeneration, diabetes, and cancers. Model organisms are frequently employed in the field as the UPR pathways are generally well-conserved throughout phyla. Here, we introduce experimental procedures to detect UPR in Drosophila melanogaster.

Indexed as

DrosophilaEndoplasmic Reticulum StressAnimalsDrosophila melanogasterEndoplasmic ReticulumUnfolded Protein ResponseATF4 (crc)Drosophila melanogasterER stressEye discsFat bodyIRE1PERKUnfolded Protein ResponseXbp1

Identifiers

PMID34985706
PMCPMC9764256
OpenAlexW4205524237

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.