Evidence map›Paper›PMID 34985298›Full record

ArticleMicrobiology spectrum2022

Novel DNA Markers for Identification of Actinobacillus pleuropneumoniae.

Gun Srijuntongsiri, Atiwat Mhoowai, Sukuma Samngamnim, Pornchalit Assavacheep, Janine T Bossé, Paul R Langford, Navaporn Posayapisit, Ubolsree Leartsakulpanich, Warangkhana Songsungthong

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Characterization ofFrontiers in veterinary science · 2026
    Article
  4. Animals : an open access journal from MDPI · 2024
    Article
  5. Article
  6. Specific biomarker mining and rapid detection ofFrontiers in microbiology · 2023
    Article
  7. Frontiers in veterinary science · 2023
    Article
  8. Rapid Detection ofFrontiers in veterinary science · 2022
    Article
  9. Specific quantitative detection ofFrontiers in cellular and infection microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Gun SrijuntongsiriSchool of Information, Computer, and Communication Technology (ICT), Sirindhorn International Institute of Technology, Thammasat Universitygrid.412434.4, Pathum Thani, Thailand.
Atiwat MhoowaiNational Center for Genetic Engineering and Biotechnologygrid.419250.b (BIOTEC), National Science and Technology Agency (NSTDA), Pathum Thani, Thailand.
Sukuma SamngamnimDepartment of Veterinary Medicine, Faculty of Veterinary Science, Chulalongkorn Universitygrid.7922.e, Bangkok, Thailand.
Pornchalit AssavacheepDepartment of Veterinary Medicine, Faculty of Veterinary Science, Chulalongkorn Universitygrid.7922.e, Bangkok, Thailand.
Janine T BosséSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College Londongrid.7445.2, London, United Kingdom.ORCID 0000-0002-8491-4779
Paul R LangfordSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College Londongrid.7445.2, London, United Kingdom.ORCID 0000-0002-6368-4724
Navaporn PosayapisitNational Center for Genetic Engineering and Biotechnologygrid.419250.b (BIOTEC), National Science and Technology Agency (NSTDA), Pathum Thani, Thailand.
Ubolsree LeartsakulpanichNational Center for Genetic Engineering and Biotechnologygrid.419250.b (BIOTEC), National Science and Technology Agency (NSTDA), Pathum Thani, Thailand.
Warangkhana SongsungthongNational Center for Genetic Engineering and Biotechnologygrid.419250.b (BIOTEC), National Science and Technology Agency (NSTDA), Pathum Thani, Thailand.ORCID 0000-0001-7824-5153
National Science and Technology Development Agency · THChulalongkorn University · THImperial College London · GBThammasat University · TH

Funding

Biotechnology and Biological Sciences Research Council BB/S002103/1
6 · The paper itself

Abstract

Actinobacillus pleuropneumoniae causes porcine pleuropneumonia, an important disease in the pig industry. Accurate and sensitive diagnostics such as DNA-based diagnostics are essential for preventing or responding to an outbreak. The specificity of DNA-based diagnostics depends on species-specific markers. Previously, an insertion element was found within an A. pleuropneumoniae-specific gene commonly used for A. pleuropneumoniae detection, prompting the need for additional species-specific markers. Herein, 12 marker candidates highly conserved (99 - 100% identity) among 34 A. pleuropneumoniae genomes (covering 13 serovars) were identified to be A. pleuropneumoniae-specific

Indexed as

Actinobacillus pleuropneumoniaeAnimalsBacterial ProteinsGenetic MarkersGenome, BacterialPathology, MolecularPleuropneumoniaPolymerase Chain ReactionSwineSwine DiseasesBacterial ProteinsGenetic MarkersActinobacillus pleuropneumoniaediagnosticsmarker discoveryporcine pleuropneumoniaspecies-specific DNA markers

Identifiers

PMID34985298
PMCPMC8729771
OpenAlexW4206702309

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.