Evidence map›Paper›PMID 34983122›Full record

ArticleInvestigative and clinical urology2022

Prediction of clinically significant prostate cancer using polygenic risk models in Asians.

Sang Hun Song, Eunae Kim, Eunjin Woo, Eunkyung Kwon, Sungroh Yoon, Jung Kwon Kim, Hakmin Lee, Jong Jin Oh, Sangchul Lee, Sung Kyu Hong and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Investigative and clinical urology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Predicting the germline dependence of hematuria risk in prostate cancer radiotherapy patients.Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Sang Hun Song *Department of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0003-3016-0032
Eunae Kim *Procagen, Seongnam, Korea.ORCID 0000-0002-4842-2734
Eunjin WooProcagen, Seongnam, Korea.ORCID 0000-0002-0604-3947
Eunkyung KwonDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0003-1323-9996
Sungroh YoonDepartment of Electrical and Computer Engineering, Seoul National University, Seoul, Korea.ORCID 0000-0002-2367-197X
Jung Kwon KimDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0002-8069-6225
Hakmin LeeDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0002-1247-9958
Jong Jin OhDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0003-0448-5992
Sangchul LeeDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0003-0844-6843
Sung Kyu HongDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0002-8344-6774
Seok-Soo ByunDepartment of Urology, Seoul National University Bundang Hospital, Seongnam, Korea.ORCID 0000-0001-9356-9500
Seoul National University · KRSeoul National University Bundang Hospital · KRCrystalGenomics (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo develop and evaluate the performance of a polygenic risk score (PRS) constructed in a Korean male population to predict clinically significant prostate cancer (csPCa). MATERIALS AND

methodsTotal 2,702 PCa samples and 7,485 controls were used to discover csPCa susceptible single nucleotide polymorphisms (SNPs). Males with biopsy-proven or post-radical prostatectomy Gleason score 7 or higher were included for analysis. After genotype imputation for quality control, logistic regression models were applied to test association and calculate effect size. Extracted candidate SNPs were further tested to compare predictive performance according to number of SNPs included in the PRS. The best-fit model was validated in an independent cohort of 311 cases and 822 controls.

resultsOf the 83 candidate SNPs with significant PCa association reported in previous literature, rs72725879 located in

conclusionsEthnic-specific PRS was developed and validated in Korean males to predict csPCa susceptibility using the largest csPCa sample size in Asia. PRS can be a potential biomarker to predict individual risk. Future multi-ethnic trials are required to further validate our results.

Indexed as

Multifactorial InheritanceAgedAsian PeopleCohort StudiesGenetic Predisposition to DiseaseHumansMaleMiddle AgedPolymorphism, Single NucleotideProstatic NeoplasmsRisk FactorsGenome-wide association studyMultifactorial inheritancePolymorphism, single nucleotideProstatic neoplasms

Identifiers

PMID34983122
PMCPMC8756152
OpenAlexW3207710685

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.