Evidence map›Paper›PMID 34982836›Full record

ArticleMedical physics2022

Quantification of uptake in pelvis F-18 FLT PET-CT images using a 3D localization and segmentation CNN.

Xiaofan Xiong, Brian J Smith, Stephen A Graves, John J Sunderland, Michael M Graham, Brandie A Gross, John M Buatti, Reinhard R Beichel

Open access · greenAbstract read
In one paragraph

Article in Medical physics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Estimating normal metabolic activity for disease quantification via PET/CT images.Proceedings of SPIE--the International Society for Optical Engineering · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xiaofan XiongDepartment of Biomedical Engineering, The University of Iowa, Iowa City, Iowa, USA.
Brian J SmithDepartment of Biostatistics, The University of Iowa, Iowa City, Iowa, USA.
Stephen A GravesDepartment of Radiology, The University of Iowa, Iowa City, Iowa, USA.
John J SunderlandDepartment of Radiology, The University of Iowa, Iowa City, Iowa, USA.
Michael M GrahamDepartment of Radiology, The University of Iowa, Iowa City, Iowa, USA.
Brandie A GrossDepartment of Radiation Oncology, University of Iowa Hospitals and Clinics, Iowa City, Iowa, USA.
John M BuattiDepartment of Radiation Oncology, University of Iowa Hospitals and Clinics, Iowa City, Iowa, USA.
Reinhard R BeichelDepartment of Electrical and Computer Engineering, The University of Iowa, Iowa City, Iowa, USA.
University of Iowa · USUniversity of Iowa Hospitals and Clinics · US

Funding

Quantitative Imaging to Assess Response in Cancer Therapy TrialsU01CA140206 · NCI · UNIVERSITY OF IOWA · PI BUATTI, JOHN M, CASAVANT, THOMAS L. · 2010 to 2019
$5.8M
NCI NIH HHS U01 CA140206NCI NIH HHS U01CA140206
6 · The paper itself

Abstract

purposeThe purpose of this work was to develop and validate a deep convolutional neural network (CNN) approach for the automated pelvis segmentation in computed tomography (CT) scans to enable the quantification of active pelvic bone marrow by means of Fluorothymidine F-18 (FLT) tracer uptake measurement in positron emission tomography (PET) scans. This quantification is a critical step in calculating bone marrow dose for radiopharmaceutical therapy clinical applications as well as external beam radiation doses.

methodsAn approach for the combined localization and segmentation of the pelvis in CT volumes of varying sizes, ranging from full-body to pelvis CT scans, was developed that utilizes a novel CNN architecture in combination with a random sampling strategy. The method was validated on 34 planning CT scans and 106 full-body FLT PET-CT scans using a cross-validation strategy. Specifically, two different training and CNN application options were studied, quantitatively assessed, and statistically compared.

resultsThe proposed method was able to successfully locate and segment the pelvis in all test cases. On all data sets, an average Dice coefficient of 0.9396

conclusionsThe proposed method enables the efficient calculation of FLT uptake in the pelvis. Thus, it represents a valuable tool to facilitate bone marrow preserving adaptive radiation therapy and radiopharmaceutical dose calculation. Furthermore, the method can be adapted to process other bone structures as well as organs.

Indexed as

DideoxynucleosidesNeural Networks, ComputerPelvisPositron Emission Tomography Computed TomographyImage Processing, Computer-AssistedRadiopharmaceuticalsalovudineDideoxynucleosidesRadiopharmaceuticalsbone marrowFLT PET-CTlocalizationpelvissegmentation

Identifiers

PMID34982836
PMCPMC9447843
OpenAlexW4205686494

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.