Evidence map›Paper›PMID 34980275›Full record

ArticleTropical medicine and health2022

RNA purification-free detection of SARS-CoV-2 using reverse transcription loop-mediated isothermal amplification (RT-LAMP).

Meng Yee Lai, Jeyanthi Suppiah, Ravindran Thayan, Ilyiana Ismail, Nur Izati Mustapa, Tuan Suhaila Tuan Soh, Afifah Haji Hassan, Kalaiarasu M Peariasamy, Yee Leng Lee, Yee Ling Lau

Erratum issuedAbstract read
In one paragraph

Article in Tropical medicine and health, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Meng Yee LaiDepartment of Parasitology, Faculty of Medicine, University Malaya, 50603, Kuala Lumpur, Malaysia.
Jeyanthi SuppiahVirology Unit, Infectious Disease Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health, Shah Alam, Selangor, Malaysia.
Ravindran ThayanVirology Unit, Infectious Disease Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health, Shah Alam, Selangor, Malaysia.
Ilyiana IsmailDepartment of Pathology, Hospital Sungai Buloh, Ministry of Health, Sungai Buloh, Selangor, Malaysia.
Nur Izati MustapaDepartment of Pathology, Hospital Sungai Buloh, Ministry of Health, Sungai Buloh, Selangor, Malaysia.
Tuan Suhaila Tuan SohDepartment of Pathology, Hospital Sungai Buloh, Ministry of Health, Sungai Buloh, Selangor, Malaysia.
Afifah Haji HassanDepartment of Pathology, Hospital Sungai Buloh, Ministry of Health, Sungai Buloh, Selangor, Malaysia.
Kalaiarasu M PeariasamyInstitute for Clinical Research, National Institutes of Health, Ministry of Health, Shah Alam, Selangor, Malaysia.
Yee Leng LeeClinical Research Centre, Hospital Sungai Buloh, Ministry of Health, Sungai Buloh, Selangor, Malaysia.
Yee Ling LauDepartment of Parasitology, Faculty of Medicine, University Malaya, 50603, Kuala Lumpur, Malaysia. lauyeeling@um.edu.my.

Funding

The impact of quality end-of-life care in nursing homesR01NR009547 · NINR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI FORBES-THOMPSON, SARAH ANN · 2006 to 2010
$1.6M
Ministry of Education Malaysia PR001-2020B (PRGS/2/2020/SKK09/UM/02/1)NINR NIH HHS R01 NR009547
6 · The paper itself

Abstract

backgroundCurrent diagnosis of SARS-CoV-2 infection relies on RNA purification prior to amplification. Typical extraction methods limit the processing speed and turnaround time for SARS-CoV-2 diagnostic testing.

methodsHere, we applied reverse transcription loop-mediated isothermal amplification directly onto human clinical swabs samples to amplify the RNA from SARS-CoV-2 swab samples after processing with chelating resin.

resultsBy testing our method on 64 samples, we managed to develop an RT-LAMP assay with 95.9% sensitivity (95% CI 86 to 99.5%) and 100% specificity (95% CI 78.2-100%).

conclusionThe entire process including sample processing can be completed in approximately 50 min. This method has promising potential to be applied as a fast, simple and inexpensive diagnostic tool for the detection of SARS-CoV-2.

Indexed as

COVID-19Nasopharyngeal swabRT-LAMPSARS-CoV-2

Identifiers

PMID34980275
PMCPMC8723997

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.