Evidence map›Paper›PMID 34979927›Full record

ArticleBMC plant biology2022

CRISPR-Cas9-mediated mutagenesis of the SlSRM1-like gene leads to abnormal leaf development in tomatoes.

Yao Tang, Huijia Li, Chunxin Liu, Yuqing He, Hexuan Wang, Tingting Zhao, Xiangyang Xu, Jingfu Li, Huanhuan Yang, Jingbin Jiang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Haploid Induction in Tomato (Plants (Basel, Switzerland) · 2022
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yao TangCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Huijia LiCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Chunxin LiuCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Yuqing HeCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Hexuan WangCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Tingting ZhaoCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Xiangyang XuCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China.
Jingfu LiCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China. lijf_2005@126.com.
Huanhuan YangCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China. 848319534@qq.com.
Jingbin JiangCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang Province, China. jjb1248@126.com.
Northeast Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeaves, which are the most important organs of plants, can not only fix carbon sources through photosynthesis, but also absorb nutrients through transpiration. Leaf development directly determines the growth, flowering and fruiting of plants. There are many factors that affect leaf development, such as the growth environment, gene expression, and hormone synthesis. In this study, tomatoes were used to study the role of the transcription factor Solanum lycopersicum salt-related MYB1-like (SlSRM1-like) in the development of tomato leaves.

resultsLoss-of-function of the SlSRM1-like gene mediated by clustered, regularly interspaced, short palindromic repeat (CRISPR)/CRISPR-associated 9 (Cas9) resulted in abnormal tomato leaf morphology, including thinner leaves, wrinkled edges, raised veins, disordered edge veins, and left and right asymmetry. An analysis of the transcription levels of genes related to leaf development revealed that the expression of these genes was significantly altered in the SlSRM1-like mutants (SlSRM1-like-Ms). Moreover, the SlSRM1-like gene was expressed at higher transcription levels in young tissues than in old tissues, and its expression was also induced in response to auxin. In addition, the transcription levels of genes related to the auxin pathway, which regulates tomato growth and development, were severely affected in the SlSRM1-like-Ms. Therefore, it is hypothesized that the SlSRM1-like gene functions in the regulation of tomato leaf development through the auxin-related pathway.

conclusionsIn this study, we successfully knocked out the SlSRM1-like gene in the tomato variety Ailsa Craig using CRISPR technology and found that knockout of the SlSRM1-like gene resulted in abnormal development of tomato leaves. Further research indicated that SlSRM1-like regulated tomato leaf development through auxin-related pathways. The results provide an important reference for the functional study of other SRM1-like genes in plants and provide new insights into the regulation of leaf development in tomato and other plants.

Indexed as

CRISPR-Cas SystemsMutagenesisPlant LeavesPlant ProteinsSolanum lycopersicumPlant ProteinsAuxinCRISPR/Cas9Leaf developmentSlSRM1-likeTomato

Identifiers

PMID34979927
PMCPMC8722279
OpenAlexW4205743162

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.