Evidence map›Paper›PMID 34979569›Full record

ArticleArchives of pathology & laboratory medicine2022

Efficient Visualization of Whole Slide Images in Web-based Viewers for Digital Pathology.

Peter J Schüffler, Evangelos Stamelos, Ishtiaque Ahmed, D Vijay K Yarlagadda, Orly Ardon, Matthew G Hanna, Victor E Reuter, David S Klimstra, Meera Hameed

Abstract read
In one paragraph

Article in Archives of pathology & laboratory medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Digital Pathology in Hematopathology: From Vision to Deployment.International journal of laboratory hematology · 2026
    Review
  2. Article
  3. The Iris File Extension.Journal of pathology informatics · 2025
    Article
  4. Article
  5. Iris: A Next Generation Digital Pathology Rendering Engine.Journal of pathology informatics · 2025
    Article
  6. Review
  7. Article
  8. Quality Management System in Clinical Digital Pathology Operations at a Tertiary Cancer Center.Laboratory investigation; a journal of technical methods and pathology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Peter J SchüfflerFrom the Institute of Pathology, Technical University of Munich, Munich, Germany (Schüffler).
Evangelos StamelosFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
Ishtiaque AhmedFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
D Vijay K YarlagaddaFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
Orly ArdonFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
Matthew G HannaFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
Victor E ReuterFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
David S KlimstraFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).
Meera HameedFrom the Department of Pathology, Memorial Sloan Kettering Cancer Center, New York City, New York (Schüffler, Stamelos, Ahmed, Yarlagadda, Ardon, Hanna, Reuter, Klimstra, Hameed).

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

CONTEXT.—: Wide adoption of digital pathology requires efficient visualization and navigation in Web-based digital slide viewers, which is poorly defined. OBJECTIVE.—: To define and quantify relevant performance metrics for efficient visualization of cases and slides in digital slide viewers. DESIGN.—: With a universal slide viewer used in clinical routine diagnostics, we evaluated the impact of slide caching, compression type, tile, and block size of whole slide images generated from Philips, Leica, and 3DHistech scanners on streaming performance on case, slide, and field of view levels. RESULTS.—: Two hundred thirty-nine pathologists routinely reviewed 60 080 whole slide images over 3 months. The median time to open a case's slides from the laboratory information system was less than 4 seconds, the time to change to a slide within the case was less than 1 second, and the time to render the adjacent field of view when navigating the slide was less than one-quarter of a second. A whole slide image's block size and a viewer tile size of 1024 pixels showed best performance to display a field of view and was preferrable over smaller tiles due to fewer mosaic effects. For Philips, fastest median slide streaming pace was 238 ms per field of view and for 3DHistech, 125 ms. For Leica, the fastest pace of 108 ms per field of view was established with block serving without decompression. CONCLUSIONS.—: This is the first study to systematically assess user-centric slide visualization performance metrics for digital viewers, including time to open a case, time to change a slide, and time to change a field of view. These metrics help to improve the viewer's configuration, leading to an efficient visualization baseline that is widely accepted among pathologists using routine digital pathology.

Indexed as

Clinical Laboratory Information SystemsTelepathologyHumansInternetSoftware

Identifiers

PMID34979569
PMCPMC10060618

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.