Evidence map›Paper›PMID 34978575›Full record

ArticleMolecular biology and evolution2022

Horizontally Acquired Cellulases Assist the Expansion of Dietary Range in Pristionchus Nematodes.

Ziduan Han, Bogdan Sieriebriennikov, Vladislav Susoy, Wen-Sui Lo, Catia Igreja, Chuanfu Dong, Aileen Berasategui, Hanh Witte, Ralf J Sommer

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Ziduan HanDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Bogdan SieriebriennikovDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Vladislav SusoyDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Wen-Sui LoDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Catia IgrejaDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Chuanfu DongDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Aileen BerasateguiDepartment of Biology, Emory University, Atlanta, GA, USA.
Hanh WitteDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.
Ralf J SommerDepartment for Integrative Evolutionary Biology, Max-Planck Institute for Biology, Tuebingen, Germany.ORCID 0000-0003-1503-7749
Max Planck Institute for Biology · DEEmory University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal gene transfer (HGT) enables the acquisition of novel traits via non-Mendelian inheritance of genetic material. HGT plays a prominent role in the evolution of prokaryotes, whereas in animals, HGT is rare and its functional significance is often uncertain. Here, we investigate horizontally acquired cellulase genes in the free-living nematode model organism Pristionchus pacificus. We show that these cellulase genes 1) are likely of eukaryotic origin, 2) are expressed, 3) have protein products that are secreted and functional, and 4) result in endo-cellulase activity. Using CRISPR/Cas9, we generated an octuple cellulase mutant, which lacks all eight cellulase genes and cellulase activity altogether. Nonetheless, this cellulase-null mutant is viable and therefore allows a detailed analysis of a gene family that was horizontally acquired. We show that the octuple cellulase mutant has associated fitness costs with reduced fecundity and slower developmental speed. Furthermore, by using various Escherichia coli K-12 strains as a model for cellulosic biofilms, we demonstrate that cellulases facilitate the procurement of nutrients from bacterial biofilms. Together, our analysis of cellulases in Pristionchus provides comprehensive evidence from biochemistry, genetics, and phylogeny, which supports the integration of horizontally acquired genes into the complex life history strategy of this soil nematode.

Indexed as

CellulasesGene Transfer, HorizontalRhabditidaAnimalsEscherichia coli K12PhylogenyCellulasesanimal evolutionbiofilmscellulasecellulosegene duplicationhorizontal gene transfermicrobe–animal interactionsPristionchus

Identifiers

PMID34978575
PMCPMC8826503
OpenAlexW4205731729

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.