Evidence map›Paper›PMID 34978460›Full record

ArticleJournal of bacteriology2022

Mechanism of Pyridoxine 5'-Phosphate Accumulation in Pyridoxal 5'-Phosphate-Binding Protein Deficiency.

Tomokazu Ito, Honoka Ogawa, Hisashi Hemmi, Diana M Downs, Tohru Yoshimura

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of bacteriology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. A new branch of mammalian vitamin BThe FEBS journal · 2026
    Article
  2. Article
  3. Identification of YigL as a PLP/PNP phosphatase inApplied and environmental microbiology · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Tomokazu ItoDepartment of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi, Japan.
Honoka OgawaDepartment of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi, Japan.
Hisashi HemmiDepartment of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi, Japan.ORCID 0000-0002-9538-809X
Diana M DownsDepartment of Microbiology, The University of Georgiagrid.213876.9, Athens, Georgia, USA.ORCID 0000-0002-1564-6205
Tohru YoshimuraDepartment of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi, Japan.
Nagoya University · JPUniversity of Georgia · US

Funding

Rid family members neutralize endogenous metabolic stressorsR01GM095837 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI DOWNS, DIANA M. · 2011 to 2023
$3.7M
NIGMS NIH HHS R01 GM095837
6 · The paper itself

Abstract

The pyridoxal 5'-phosphate (PLP)-binding protein (PLPBP) plays an important role in vitamin B

Indexed as

Escherichia coli ProteinsPyridoxineCarrier ProteinsEscherichia coliOxidoreductasesPhosphate-Binding ProteinsPhosphatesPyridoxal PhosphateVitamin B 6VitaminsCarrier ProteinsEscherichia coli ProteinsOxidoreductasesPhosphate-Binding ProteinsPhosphatesPyridoxal PhosphatePyridoxineVitamin B 6VitaminsYggS protein, E coliPLPBPpyridoxal 5'-phosphatepyridoxamine 5'-phosphatepyridoxine 5'-phosphatevitamin B6YggS

Identifiers

PMID34978460
PMCPMC8923219
OpenAlexW4205937518

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.