Evidence map›Paper›PMID 34976872›Full record

ArticleFrontiers in cellular and infection microbiology2021

AMPing Up the Search: A Structural and Functional Repository of Antimicrobial Peptides for Biofilm Studies, and a Case Study of Its Application to

Shreeya Mhade, Stutee Panse, Gandhar Tendulkar, Rohit Awate, Yatindrapravanan Narasimhan, Snehal Kadam, Ragothaman M Yennamalli, Karishma S Kaushik

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Artificial intelligence catalyzes antimicrobial peptide design.Synthetic and systems biotechnology · 2027
    Review
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  3. Review
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  5. Review
  6. Prescription of Rifampicin forPathogens (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Pathogens (Basel, Switzerland) · 2022
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 3 countries.

Shreeya MhadeDepartment of Bioinformatics, Guru Nanak Khalsa College of Arts, Science and Commerce (Autonomous), Mumbai, India.
Stutee PanseHuck Institutes of Life Sciences, The Pennsylvania State University, University Park, College State, PA, United States.
Gandhar TendulkarDepartment of Bioinformatics, Sir Sitaram and Lady Shantabai Patkar College of Arts and Science and V P Varde College of Commerce and Economics (Autonomous), Mumbai, India.
Rohit AwateKhoury College of Computer Sciences, Northeastern University, Boston, MA, United States.
Yatindrapravanan NarasimhanDepartment of Bioinformatics, School of Chemical and Biotechnology, Shanmugha Arts, Science, Technology & Research Academy (SASTRA), Deemed to Be University, Thanjavur, India.
Snehal KadamHull York Medical School, University of Hull, Hull, United Kingdom.
Ragothaman M YennamalliDepartment of Bioinformatics, School of Chemical and Biotechnology, Shanmugha Arts, Science, Technology & Research Academy (SASTRA), Deemed to Be University, Thanjavur, India.
Karishma S KaushikDepartment of Biotechnology, Savitribai Phule Pune University, Pune, India.
SASTRA University · ING.S. Science, Arts And Commerce College · INNortheastern University · USPennsylvania State University · USSavitribai Phule Pune University · INUniversity of Hull · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antimicrobial peptides (AMPs) have been recognized for their ability to target processes important for biofilm formation. Given the vast array of AMPs, identifying potential anti-biofilm candidates remains a significant challenge, and prompts the need for preliminary

Indexed as

Antimicrobial PeptidesBiofilmsCorynebacteriumMolecular Docking SimulationAntimicrobial Peptidesantimicrobial peptidesbiofilmscurated databasefunctional annotationmolecular dockingmolecular modelingstructural repository

Identifiers

PMID34976872
PMCPMC8716830
OpenAlexW4200167867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.