Evidence map›Paper›PMID 34976337›Full record

ArticleChemical science2021

Genetic encoding of a highly photostable, long lifetime fluorescent amino acid for imaging in mammalian cells.

Chloe M Jones, D Miklos Robkis, Robert J Blizzard, Mika Munari, Yarra Venkatesh, Tiberiu S Mihaila, Alex J Eddins, Ryan A Mehl, William N Zagotta, Sharona E Gordon and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  3. A Historical Outline of Fluorescence Spectroscopy in Ion Channel Research.Advances in experimental medicine and biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Chloe M JonesDepartment of Chemistry, University of Pennsylvania 231 South 34th Street Philadelphia PA 19104 USA ejpetersson@sas.upenn.edu.ORCID https://orcid.org/0000-0002-7131-685X
D Miklos RobkisDepartment of Chemistry, University of Pennsylvania 231 South 34th Street Philadelphia PA 19104 USA ejpetersson@sas.upenn.edu.ORCID https://orcid.org/0000-0001-5958-5478
Robert J BlizzardDepartment of Biochemistry and Biophysics, Oregon State University 2011 Ag Life Sciences Building Corvallis Oregon 97331 USA.
Mika MunariDepartment of Physiology and Biophysics, University of Washington 1705 NE Pacific St., Box 357290 Seattle WA 98195 USA.
Yarra VenkateshDepartment of Chemistry, University of Pennsylvania 231 South 34th Street Philadelphia PA 19104 USA ejpetersson@sas.upenn.edu.ORCID https://orcid.org/0000-0002-4478-1553
Tiberiu S MihailaDepartment of Chemistry, University of Pennsylvania 231 South 34th Street Philadelphia PA 19104 USA ejpetersson@sas.upenn.edu.ORCID https://orcid.org/0000-0003-4900-7214
Alex J EddinsDepartment of Biochemistry and Biophysics, Oregon State University 2011 Ag Life Sciences Building Corvallis Oregon 97331 USA.
Ryan A MehlDepartment of Biochemistry and Biophysics, Oregon State University 2011 Ag Life Sciences Building Corvallis Oregon 97331 USA.ORCID https://orcid.org/0000-0003-2932-4941
William N ZagottaDepartment of Physiology and Biophysics, University of Washington 1705 NE Pacific St., Box 357290 Seattle WA 98195 USA.ORCID https://orcid.org/0000-0002-7631-8168
Sharona E GordonDepartment of Physiology and Biophysics, University of Washington 1705 NE Pacific St., Box 357290 Seattle WA 98195 USA.ORCID https://orcid.org/0000-0002-0914-3361
E James PeterssonBiochemistry and Molecular Biophysics Graduate Group, University of Pennsylvania 3700 Hamilton Walk Philadelphia PA 19104 USA.ORCID https://orcid.org/0000-0003-3854-9210
University of Pennsylvania · USOregon State University · USUniversity of Washington · US

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 1985 to 2026
$23.5M
GATING MECHANISMS OF RETINAL ROD CGMP-ACTIVATED CHANNELSR01EY010329 · NEI · UNIVERSITY OF WASHINGTON · PI ZAGOTTA, WILLIAM N · 1994 to 2023
$7.7M
Inflammatory hyperalgesia mediated by TRPV1, the pepper spray receptor in the corR01EY017564 · NEI · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E · 2006 to 2022
$6.5M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008275 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WAND, A. JOSHUA · 1988 to 2018
$6.0M
Conformational Energetics and Heterogeneity to Reveal Gating Mechanisms of TRPV and TRPM Ion ChannelsR35GM145225 · NIGMS · UNIVERSITY OF WASHINGTON · PI Sharona E Gordon · 2022 to 2026
$3.4M
Studying Aggregation in Neurodegenerative Disease Using Synthetic ProteinsR01NS103873 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI Ernest James Petersson · 2019 to 2026
$2.1M
Supplement to Multimodal Gating Mechanisms of TRPV1 Ion ChannelsR01GM125351 · NIGMS · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E · 2018 to 2021
$1.8M
Structural mechanisms for gating of bacterial cyclic nucleotide-gated ion channelsR01GM127325 · NIGMS · UNIVERSITY OF WASHINGTON · PI ZAGOTTA, WILLIAM N · 2018 to 2021
$1.6M
Mechanisms of TRPV1 Channel RegulationR01GM100718 · NIGMS · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E, ZAGOTTA, WILLIAM N · 2012 to 2015
$1.5M
Development of an improved core technology for efficient genetic code expansion in biomedical researchR01GM131168 · NIGMS · OREGON STATE UNIVERSITY · PI MEHL, RYAN A · 2019 to 2021
$1.1M
Electrophysiology-Optical Workstation for Ion Channel BiophysicsS10RR025429 · NCRR · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E · 2009 to 2009
$499k
Ion Mobility Time-of-flight Mass Spectrometry SystemS10RR025628 · NCRR · OREGON STATE UNIVERSITY · PI MAIER, CLAUDIA S, STEVENS, JAN FREDERIK · 2009 to 2009
$440k
NCRR NIH HHS S10 RR025429NCRR NIH HHS S10 RR025628NEI NIH HHS P30 EY001730NEI NIH HHS R01 EY010329NEI NIH HHS R01 EY017564NIGMS NIH HHS R01 GM100718NIGMS NIH HHS R01 GM125351NIGMS NIH HHS R01 GM127325NIGMS NIH HHS R01 GM131168NIGMS NIH HHS R35 GM145225NIGMS NIH HHS T32 GM008275NINDS NIH HHS R01 NS103873
6 · The paper itself

Abstract

Acridonylalanine (Acd) is a fluorescent amino acid that is highly photostable, with a high quantum yield and long fluorescence lifetime in water. These properties make it superior to existing genetically encodable fluorescent amino acids for monitoring protein interactions and conformational changes through fluorescence polarization or lifetime experiments, including fluorescence lifetime imaging microscopy (FLIM). Here, we report the genetic incorporation of Acd using engineered pyrrolysine tRNA synthetase (RS) mutants that allow for efficient Acd incorporation in both

Identifiers

PMID34976337
PMCPMC8634729
OpenAlexW3191799828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.