Evidence map›Paper›PMID 34973129›Full record

ArticleHepatology international2022

Patients with polyclonal hepatocellular carcinoma are at a high risk of early recurrence and have a poor recurrence-free survival period.

Masaki Kaibori, Kazuko Sakai, Hideyuki Matsushima, Hisashi Kosaka, Kosuke Matsui, Marco A De Velasco, Mitsugu Sekimoto, Kazuto Nishio

Abstract read
In one paragraph

Article in Hepatology international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Masaki Kaibori *Department of Surgery, Hirakata Hospital, Kansai Medical University, Hirakata, Osaka, Japan.
Kazuko Sakai *Department of Genome Biology, Faculty of Medicine, Kindai University, 377-2 Ohno-Higashi, Osaka-Sayama, Osaka, 589-8511, Japan.
Hideyuki MatsushimaDepartment of Surgery, Hirakata Hospital, Kansai Medical University, Hirakata, Osaka, Japan.
Hisashi KosakaDepartment of Surgery, Hirakata Hospital, Kansai Medical University, Hirakata, Osaka, Japan.
Kosuke MatsuiDepartment of Surgery, Hirakata Hospital, Kansai Medical University, Hirakata, Osaka, Japan.
Marco A De VelascoDepartment of Genome Biology, Faculty of Medicine, Kindai University, 377-2 Ohno-Higashi, Osaka-Sayama, Osaka, 589-8511, Japan.
Mitsugu SekimotoDepartment of Surgery, Hirakata Hospital, Kansai Medical University, Hirakata, Osaka, Japan.
Kazuto NishioDepartment of Genome Biology, Faculty of Medicine, Kindai University, 377-2 Ohno-Higashi, Osaka-Sayama, Osaka, 589-8511, Japan. knishio@med.kindai.ac.jp.ORCID http://orcid.org/0000-0002-8275-0846

Funding

japan society for the promotion of science JP19K07722
6 · The paper itself

Abstract

background/purpose of the studyTumor heterogeneity based on copy number variations is associated with the evolution of cancer and its clinical grade. Clonal composition (CC) represents the number of clones based on the distribution of B-allele frequency (BAF) obtained from a genome-wide single nucleotide polymorphism (SNP) array. A higher CC number represents a high degree of heterogeneity. We hypothesized and evaluated that the CC number in hepatocellular carcinoma (HCC) tissues might be associated with the clinical outcomes of patients.

methodsSomatic mutation, whole transcriptome, and CC number based on copy number variations of 36 frozen tissue samples of operably resected HCC tissues were analyzed by targeted deep sequencing, transcriptome analysis, and SNP array.

resultsThe samples were classified into the heterogeneous tumors as poly-CC (n = 26) and the homogeneous tumors as mono-CC (n = 8). The patients with poly-CC had a higher rate of early recurrence and a significantly shorter recurrence-free survival period than the mono-CC patients (7.0 months vs. not reached, p = 0.0084). No differences in pathogenic non-synonymous mutations, such as TP53, were observed between the two groups when targeted deep sequencing was applied. A transcriptome analysis showed that cell cycle-related pathways were enriched in the poly-CC tumors, compared to the mono-CC tumors. Poly-CC HCC is highly proliferative and has a high risk of early recurrence.

conclusionCC is a possible candidate biomarker for predicting the risk of early postoperative recurrence and warrants further investigation.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsDNA Copy Number VariationsHumansB-allele frequencyClonal compositionCopy number variationEarly recurrenceGene expressionGene set enrichment analysisHepatocellular carcinomaProliferationRecurrence-free survivalSingle nucleotide polymorphism array

Identifiers

PMID34973129
PMCPMC8843910

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