Evidence map›Paper›PMID 34972826›Full record

ArticleScientific reports2021

Comparative de novo transcriptome analysis identifies salinity stress responsive genes and metabolic pathways in sugarcane and its wild relative Erianthus arundinaceus [Retzius] Jeswiet.

P Vignesh, C Mahadevaiah, R Parimalan, R Valarmathi, S Dharshini, Singh Nisha, G S Suresha, S Swathi, H K Mahadeva Swamy, V Sreenivasa and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

P Vignesh *ICAR-Sugarcane Breeding Institute, Coimbatore, India.
C Mahadevaiah *ICAR-Sugarcane Breeding Institute, Coimbatore, India. C.Mahadevaiah@icar.gov.in.
R ParimalanICAR-National Bureau of Plant Genetic Resources, New Delhi, India.
R ValarmathiICAR-Sugarcane Breeding Institute, Coimbatore, India.
S DharshiniICAR-Sugarcane Breeding Institute, Coimbatore, India.
Singh NishaICAR-National Institute for Plant Biotechnology, New Delhi, India.
G S SureshaICAR-Sugarcane Breeding Institute, Coimbatore, India.
S SwathiICAR-Sugarcane Breeding Institute, Coimbatore, India.
H K Mahadeva SwamyICAR-Sugarcane Breeding Institute, Coimbatore, India.
V SreenivasaICAR-Sugarcane Breeding Institute, Coimbatore, India.
K MohanrajICAR-Sugarcane Breeding Institute, Coimbatore, India.
G HemaprabhaICAR-Sugarcane Breeding Institute, Coimbatore, India.
Ram BakshiICAR-Sugarcane Breeding Institute, Coimbatore, India.
C AppunuICAR-Sugarcane Breeding Institute, Coimbatore, India. cappunu@gmail.com.
Sugarcane Breeding Institute · INNational Research Centre on Plant Biotechnology · INUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Erianthus arundinaceus [Retzius] Jeswiet, a wild relative of sugarcane has a high biomass production potential and a reservoir of many genes for superior agronomic traits and tolerance to biotic and abiotic stresses. A comparative physiological, anatomical and root transcriptome analysis were carried out to identify the salt-responsive genes and metabolic pathways associated with salt-tolerant E. arundinaceus genotype IND99-907 and salinity-sensitive sugarcane genotype Co 97010. IND99-907 recorded growth of young leaves, higher proline content, higher relative water content, intact root anatomical structures and lower Na

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantSalt StressTranscriptomeComputational BiologyData CurationEnergy MetabolismOrgan SpecificityPhenotypePlant Physiological PhenomenaSaccharumSalt Tolerance

Identifiers

PMID34972826
PMCPMC8720094
OpenAlexW4205590027

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.