Evidence map›Paper›PMID 34972822›Full record

ArticleNature microbiology2022

Gut microbiomes from Gambian infants reveal the development of a non-industrialized Prevotella-based trophic network.

Marcus C de Goffau, Amadou T Jallow, Chilel Sanyang, Andrew M Prentice, Niamh Meagher, David J Price, Peter A Revill, Julian Parkhill, Dora I A Pereira, Josef Wagner

Registry-linked trialAbstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02941081 (A Novel Nano-iron Supplement), which is not on this map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02941081 phase2completednot on this map

A Novel Nano-iron Supplement (IHAT) to Safely Combat Iron Deficiency and Anaemia (IDA) in Young Children: a Doubleblind Randomised Controlled Trial

TypeinterventionalSponsorLondon School of Hygiene and Tropical MedicineRan2018 to 2019Enrolled645ConditionsIron Deficiency, Anaemia in ChildrenArmsIHAT, Ferrous Sulphate, Placebo
3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Bridging the gap:Gut microbes · 2026
    Review
  6. Article
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  8. [The Oral Microbiome: Maintenance of Homeostasis, Disease Associations, and Mechanisms of Pathogenesis].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2026
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Marcus C de Goffau *Parasites and Microbes, Wellcome Sanger Institute, Cambridge, UK.
Amadou T Jallow *Medical Research Council Unit The Gambia at the London School of Hygiene & Tropical Medicine, Banjul, The Gambia.
Chilel SanyangMedical Research Council Unit The Gambia at the London School of Hygiene & Tropical Medicine, Banjul, The Gambia.
Andrew M PrenticeMedical Research Council Unit The Gambia at the London School of Hygiene & Tropical Medicine, Banjul, The Gambia.ORCID http://orcid.org/0000-0001-5389-451X
Niamh MeagherDepartment of Infectious Diseases at the Doherty Institute for Infection & Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, VIC, Australia.
David J PriceDepartment of Infectious Diseases at the Doherty Institute for Infection & Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, VIC, Australia.
Peter A RevillVictorian Infectious Disease Reference Laboratory, the Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Australia.
Julian ParkhillDepartment of Veterinary Medicine, University of Cambridge, Cambridge, UK.ORCID http://orcid.org/0000-0002-7069-5958
Dora I A Pereira *Medical Research Council Unit The Gambia at the London School of Hygiene & Tropical Medicine, Banjul, The Gambia.
Josef Wagner *Parasites and Microbes, Wellcome Sanger Institute, Cambridge, UK. Josef.Wagner@mh.org.au.ORCID http://orcid.org/0000-0003-1204-7765

Funding

Medical Research Council MC_PC_MR/R020183/1Medical Research Council MC_U123292701Medical Research Council MC_UU_00026/3
6 · The paper itself

Abstract

Distinct bacterial trophic networks exist in the gut microbiota of individuals in industrialized and non-industrialized countries. In particular, non-industrialized gut microbiomes tend to be enriched with Prevotella species. To study the development of these Prevotella-rich compositions, we investigated the gut microbiota of children aged between 7 and 37 months living in rural Gambia (616 children, 1,389 stool samples, stratified by 3-month age groups). These infants, who typically eat a high-fibre, low-protein diet, were part of a double-blind, randomized iron intervention trial (NCT02941081) and here we report the secondary outcome. We found that child age was the largest discriminating factor between samples and that anthropometric indices (collection time points, season, geographic collection site, and iron supplementation) did not significantly influence the gut microbiome. Prevotella copri, Faecalibacterium prausnitzii and Prevotella stercorea were, on average, the most abundant species in these 1,389 samples (35%, 11% and 7%, respectively). Distinct bacterial trophic network clusters were identified, centred around either P. stercorea or F. prausnitzii and were found to develop steadily with age, whereas P. copri, independently of other species, rapidly became dominant after weaning. This dataset, set within a critical gut microbial developmental time frame, provides insights into the development of Prevotella-rich gut microbiomes, which are typically understudied and are underrepresented in western populations.

Indexed as

BacteriaChild, PreschoolFecesGambiaGastrointestinal MicrobiomeHumansInfantPrevotellaRandomized Controlled Trials as TopicRural Population

Identifiers

PMID34972822
PMCPMC8727306

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.