Evidence map›Paper›PMID 34968527›Full record

ArticleAntiviral research2022

S-adenosylmethionine-dependent methyltransferase inhibitor DZNep blocks transcription and translation of SARS-CoV-2 genome with a low tendency to select for drug-resistant viral variants.

Ram Kumar, Nitin Khandelwal, Yogesh Chander, Himanshu Nagori, Assim Verma, Aditya Barua, Bhagraj Godara, Yash Pal, Baldev R Gulati, Bhupendra N Tripathi and 2 more

Open access · greenAbstract read
In one paragraph

Article in Antiviral research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  5. The mCells · 2025
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  7. Targeting G9a-miScience · 2025
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  11. Review
  12. Article
  13. Sulfoglycodendron Antivirals with Scalable Architectures and Activities.Journal of chemical information and modeling · 2024
    Article
  14. Sulfoglycodendron Antivirals with Scalable Architectures and Activities.bioRxiv : the preprint server for biology · 2024
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. The risk of COVID-19 can be predicted by a nomogram based on m6A-related genes.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Ram KumarNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Nitin KhandelwalNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Yogesh ChanderNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Himanshu NagoriNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Assim VermaNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Aditya BaruaNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Bhagraj GodaraNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Yash PalNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Baldev R GulatiNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India.
Bhupendra N TripathiNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India. Electronic address: bntripathi@yahoo.co.in.
Sanjay BaruaNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India. Electronic address: sbarua06@gmail.com.
Naveen KumarNational Centre for Veterinary Type Cultures, ICAR-National Research Centre on Equines, Hisar, India. Electronic address: naveenkumar.icar@gmail.com.
National Research Centre on Equines · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the in vitro antiviral activity of DZNep (3-Deazaneplanocin A; an inhibitor of S-adenosylmethionine-dependent methyltransferase) against SARS-CoV-2, besides demonstrating its protective efficacy against lethal infection of infectious bronchitis virus (IBV, a member of the Coronaviridae family). DZNep treatment resulted in reduced synthesis of SARS-CoV-2 RNA and proteins without affecting other steps of viral life cycle. We demonstrated that deposition of N6-methyl adenosine (m6A) in SARS-CoV-2 RNA in the infected cells recruits heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1), an RNA binding protein which serves as a m6A reader. DZNep inhibited the recruitment of hnRNPA1 at m6A-modified SARS-CoV-2 RNA which eventually suppressed the synthesis of the viral genome. In addition, m6A-marked RNA and hnRNPA1 interaction was also shown to regulate early translation to replication switch of SARS-CoV-2 genome. Furthermore, abrogation of methylation by DZNep also resulted in defective synthesis of the 5' cap of viral RNA, thereby resulting in its failure to interact with eIF4E (a cap-binding protein), eventually leading to a decreased synthesis of viral proteins. Most importantly, DZNep-resistant mutants could not be observed upon long-term sequential passage of SARS-CoV-2 in cell culture. In summary, we report the novel role of methylation in the life cycle of SARS-CoV-2 and propose that targeting the methylome using DZNep could be of significant therapeutic value against SARS-CoV-2 infection.

Indexed as

AdenosineAnimalsChick EmbryoChlorocebus aethiopsChromatin Immunoprecipitation SequencingDNA MethylationDrug Resistance, ViralGenome, ViralHeterogeneous Nuclear Ribonucleoprotein A1HumansLethal Dose 50MethyltransferasesMiceProtein BiosynthesisRabbitsRNA, Viral3-deazaneplanocinAdenosineHeterogeneous Nuclear Ribonucleoprotein A1hnRNPA1 protein, humanMethyltransferasesRNA, ViralS-adenosylmethionine-dependent phosphate methyltransferaseDrug resistanceDZNepEpitranscriptomicSARS-CoV-2Virus replication

Identifiers

PMID34968527
PMCPMC8714615
OpenAlexW4200004195

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.