Evidence map›Paper›PMID 34962959›Full record

ArticlePloS one2021

Moraxella-dominated pediatric nasopharyngeal microbiota associate with upper respiratory infection and sinusitis.

Kathryn E McCauley, Gregory DeMuri, Kole Lynch, Douglas W Fadrosh, Clark Santee, Nabeetha N Nagalingam, Ellen R Wald, Susan V Lynch

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

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  14. Childhood respiratory viral infections and the microbiome.The Journal of allergy and clinical immunology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kathryn E McCauleyDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States of America.
Gregory DeMuriDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, United States of America.
Kole LynchDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States of America.
Douglas W FadroshDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States of America.
Clark SanteeDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States of America.
Nabeetha N NagalingamDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States of America.
Ellen R WaldDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, United States of America.
Susan V LynchDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States of America.ORCID 0000-0001-5695-7336
University of California, San Francisco · USUniversity of Wisconsin–Madison · US

Funding

Sinusitis in Children and the Nasopharyngeal MicrobiomeR01AI097172 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI WALD, ELLEN · 2012 to 2016
$3.6M
NIAID NIH HHS R01 AI097172
6 · The paper itself

Abstract

backgroundDistinct bacterial upper airway microbiota structures have been described in pediatric populations, and relate to risk of respiratory viral infection and, exacerbations of asthma. We hypothesized that distinct nasopharyngeal (NP) microbiota structures exist in pediatric populations, relate to environmental exposures and modify risk of acute sinusitis or upper respiratory infection (URI) in children.

methodsBacterial 16S rRNA profiles from nasopharyngeal swabs (n = 354) collected longitudinally over a one-year period from 58 children, aged four to seven years, were analyzed and correlated with environmental variables, URI, and sinusitis outcomes.

resultsVariance in nasopharyngeal microbiota composition significantly related to clinical outcomes, participant characteristics and environmental exposures including dominant bacterial genus, season, daycare attendance and tobacco exposure. Four distinct nasopharyngeal microbiota structures (Cluster I-IV) were evident and differed with respect to URI and sinusitis outcomes. These clusters were characteristically either dominated by Moraxella with sparse underlying taxa (Cluster I), comprised of a non-dominated, diverse microbiota (Cluster II), dominated by Alloiococcus/Corynebacterium (Cluster III), or by Haemophilus (Cluster IV). Cluster I was associated with increased risk of URI and sinusitis (RR = 1.18, p = 0.046; RR = 1.25, p = 0.009, respectively) in the population studied.

conclusionIn a pediatric population, URI and sinusitis associate with the presence of Moraxella-dominated NP microbiota.

Indexed as

MicrobiotaChildChild, PreschoolColony Count, MicrobialEnvironmentFemaleHumansMaleMoraxellaMoraxellaceae InfectionsNasopharynxPhylogenyPrincipal Component AnalysisRespiratory Tract InfectionsSinusitis

Identifiers

PMID34962959
PMCPMC8714118
OpenAlexW4200081579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.