Evidence map›Paper›PMID 34960739›Full record

ArticleViruses2021

Establishment of Outbreak Thresholds for Hepatitis A in South Africa Using Laboratory Surveillance, 2017-2020.

Nishi Prabdial-Sing, Villyen Motaze, Jack Manamela, Kerrigan McCarthy, Melinda Suchard

Abstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nishi Prabdial-SingDivision of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg 2131, South Africa.
Villyen MotazeDivision of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg 2131, South Africa.
Jack ManamelaDivision of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg 2131, South Africa.
Kerrigan McCarthyDivision of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg 2131, South Africa.
Melinda SuchardDivision of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg 2131, South Africa.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As South Africa transitions from endemic to intermediate endemicity, hepatitis A surveillance needs strengthening to monitor trends in disease incidence and to identify outbreaks. We used passive laboratory-based surveillance data from the National Health Laboratory Services to calculate national hepatitis A incidence and to establish thresholds for outbreaks. Incidence was calculated by age and geographic location. The static threshold used two or three standard deviations (SDs) above the mean hepatitis A incidence in 2017-2019, and a cumulative summation (CuSum2) threshold used three SDs above the mean of the preceding seven months. These thresholds were applied to hepatitis A data for 2020. From 2017 to 2020, the mean incidence of hepatitis A IgM was 4.06/100,000 and ranged from 4.23 to 4.85/100,000 per year. Hepatitis A incidence was highest in the Western Cape province (WCP) (7.00-10.92/100,000 per year). The highest incidence was in the 1-9-year-olds. The incidence of hepatitis A in 2020 exceeded the static threshold in two districts of the WCP: Cape Winelands in January and Overberg district in August. The provincial incidence did not exceed the static and CuSum2 thresholds. District-level analysis using either threshold was sensitive enough to monitor trends and to alert district health authorities, allowing early outbreak responses.

Indexed as

Disease OutbreaksEpidemiological MonitoringAdolescentAdultAge DistributionAntibodies, ViralChildChild, PreschoolFemaleHepatitis AHepatitis A Virus, HumanHumansImmunoglobulin MIncidenceMaleMiddle AgedAntibodies, ViralImmunoglobulin Mhepatitis Aincidenceoutbreaksurveillancethreshold

Identifiers

PMID34960739
PMCPMC8704411

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.