Evidence map›Paper›PMID 34960080›Full record

ArticleNutrients2021

Prenatal Iron Deficiency and Choline Supplementation Interact to Epigenetically Regulate

Shirelle X Liu, Amanda K Barks, Scott Lunos, Jonathan C Gewirtz, Michael K Georgieff, Phu V Tran

Open access · goldAbstract read
In one paragraph

Article in Nutrients, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shirelle X LiuDepartment of Pediatrics, University of Minnesota, Minneapolis, MN 55455, USA.ORCID 0000-0003-2550-008X
Amanda K BarksDepartment of Pediatrics, University of Minnesota, Minneapolis, MN 55455, USA.
Scott LunosBiostatistical Design and Analysis Center, Clinical and Translational Science Institute, University of Minnesota, Minneapolis, MN 55455, USA.
Jonathan C GewirtzDepartment of Psychology, University of Minnesota, Minneapolis, MN 55455, USA.
Michael K GeorgieffDepartment of Pediatrics, University of Minnesota, Minneapolis, MN 55455, USA.
Phu V TranDepartment of Pediatrics, University of Minnesota, Minneapolis, MN 55455, USA.ORCID 0000-0002-4301-941X
University of Minnesota · US

Funding

University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR002494 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R, WEISDORF, DANIEL J · 2018 to 2022
$34.9M
Roles of Iron-Dependent PHD and JARID in Early-Life Iron Deficiency-Induced Adult Neural Gene DysregulationR01NS099178 · NINDS · UNIVERSITY OF MINNESOTA · PI TRAN, PHU V. · 2017 to 2021
$1.6M
NIH HHS R01HD29421NIH HHS R01NS099178NIH HHS UL1TR002494NINDS NIH HHS R01 NS099178
6 · The paper itself

Abstract

Early-life iron deficiency (ID) causes long-term neurocognitive impairments and gene dysregulation that can be partially mitigated by prenatal choline supplementation. The long-term gene dysregulation is hypothesized to underlie cognitive dysfunction. However, mechanisms by which iron and choline mediate long-term gene dysregulation remain unknown. In the present study, using a well-established rat model of fetal-neonatal ID, we demonstrated that ID downregulated hippocampal expression of the gene encoding JmjC-ARID domain-containing protein 1B (JARID1B), an iron-dependent histone H3K4 demethylase, associated with a higher histone deacetylase 1 (HDAC1) enrichment and a lower enrichment of acetylated histone H3K9 (H3K9ac) and phosphorylated cAMP response element-binding protein (pCREB). Likewise, ID reduced transcriptional capacity of the gene encoding brain-derived neurotrophic factor (BDNF), a target of JARID1B, associated with repressive histone modifications such as lower H3K9ac and pCREB enrichments at the

Indexed as

Iron DeficienciesAnimalsBrain-Derived Neurotrophic FactorCholineDietary SupplementsDNA-Binding ProteinsEpigenesis, GeneticFemaleHippocampusJumonji Domain-Containing Histone DemethylasesNuclear ProteinsPregnancyPrenatal Exposure Delayed EffectsRatsRepressor ProteinsBdnf protein, ratBrain-Derived Neurotrophic FactorCholineDNA-Binding ProteinsJumonji Domain-Containing Histone DemethylasesKdm5b protein, ratNuclear ProteinsRepressor ProteinsBdnfcholineepigeneticsgene expressionhistone modificationiron deficiencyJarid1b

Identifiers

PMID34960080
PMCPMC8706459
OpenAlexW4200543095

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.