Evidence map›Paper›PMID 34959591›Full record

ArticlePathogens (Basel, Switzerland)2021

Distribution and Genetic Diversity of Hepatitis E Virus in Wild and Domestic Rabbits in Australia.

Maria Jenckel, Ina Smith, Tegan King, Peter West, Patrick L Taggart, Tanja Strive, Robyn N Hall

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Maria JenckelCSIRO Health and Biosecurity, Black Mountain, Canberra, ACT 2601, Australia.ORCID 0000-0001-9104-2369
Ina SmithCSIRO Health and Biosecurity, Black Mountain, Canberra, ACT 2601, Australia.
Tegan KingCSIRO Health and Biosecurity, Black Mountain, Canberra, ACT 2601, Australia.
Peter WestNew South Wales Department of Primary Industries, Orange 2800, Australia.
Patrick L TaggartCentre for Invasive Species Solutions, University of Canberra, Bruce, ACT 2601, Australia.
Tanja StriveCSIRO Health and Biosecurity, Black Mountain, Canberra, ACT 2601, Australia.ORCID 0000-0003-2971-8406
Robyn N HallCSIRO Health and Biosecurity, Black Mountain, Canberra, ACT 2601, Australia.ORCID 0000-0002-5836-2990
University of Canberra · AUCSIRO Health and Biosecurity · AU

Funding

Commonwealth Scientific and Industrial Research Organisation NAMeat and Livestock Australia P.PSH.1059
6 · The paper itself

Abstract

In 2020, Hepatitis E virus (HEV) was detected for the first time in Australian rabbits. To improve our understanding of the genetic diversity and distribution of the virus, 1635 rabbit liver samples from locations across Australia were screened via RT-qPCR for HEV. HEV genomes were amplified and sequenced from 48 positive samples. Furthermore, we tested 380 serum samples from 11 locations across Australia for antibodies against HEV. HEV was detected in rabbits from all states and territories, except the Northern Territory. Seroprevalence varied between locations (from 0% to 22%), demonstrating that HEV is widely distributed in rabbit populations across Australia. Phylogenetic analyses showed that Australian HEV sequences are genetically diverse and that HEV was likely introduced into Australia independently on several occasions. In summary, this study broadens our understanding of the genetic diversity of rabbit HEV globally and shows that the virus is endemic in both domestic and wild rabbit populations in Australia.

Indexed as

genomic epidemiologyhepeviridaeLuminexrabbitsseroepidemiologyserologywhole-genome sequencing

Identifiers

PMID34959591
PMCPMC8709427
OpenAlexW4200522414

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.