Evidence map›Paper›PMID 34957696›Full record

ArticlePhysiological reports2021

Quantification of FAM20A in human milk and identification of calcium metabolism proteins.

Vaksha Patel, Enriko Klootwijk, Gail Whiting, Detlef Bockenhauer, Keith Siew, Stephen Walsh, Markus Bleich, Nina Himmerkus, Graciana Jaureguiberry, Naomi Issler and 3 more

Open access · goldAbstract read
In one paragraph

Article in Physiological reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Vaksha PatelDepartment of Renal Medicine, University College London, London, UK.ORCID 0000-0001-9475-8688
Enriko KlootwijkDepartment of Renal Medicine, University College London, London, UK.
Gail WhitingNational Institute for Biological Standards and Control, Medicine and Healthcare Products Regulatory Agency, Hertfordshire, UK.
Detlef BockenhauerDepartment of Renal Medicine, University College London, London, UK.
Keith SiewDepartment of Renal Medicine, University College London, London, UK.
Stephen WalshDepartment of Renal Medicine, University College London, London, UK.
Markus BleichInstitute of Physiology, University of Kiel, Kiel, Germany.
Nina HimmerkusInstitute of Physiology, University of Kiel, Kiel, Germany.
Graciana JaureguiberryDepartment of Renal Medicine, University College London, London, UK.
Naomi IsslerDepartment of Renal Medicine, University College London, London, UK.
Jasminka Godovac-ZimmermannDepartment of Renal Medicine, University College London, London, UK.
Robert KletaDepartment of Renal Medicine, University College London, London, UK.
Jun WheelerNational Institute for Biological Standards and Control, Medicine and Healthcare Products Regulatory Agency, Hertfordshire, UK.
University College London · GBHochschule für Angewandte Wissenschaften Kiel · DENational Institute for Biological Standards and Control · GB

Funding

Department of HealthWellcome Trust
6 · The paper itself

Abstract

backgroundFAM20A, a recently discovered protein, is thought to have a fundamental role in inhibiting ectopic calcification. Several studies have demonstrated that variants of FAM20A are causative for the rare autosomal recessive disorder, enamel-renal syndrome (ERS). ERS is characterized by defective mineralization of dental enamel and nephrocalcinosis suggesting that FAM20A is an extracellular matrix protein, dysfunction of which causes calcification of the secretory epithelial tissues. FAM20A is a low-abundant protein that is difficult to detect in biofluids such as blood, saliva, and urine. Thus, we speculated the abundance of FAM20A to be high in human milk, since the secretory epithelium of lactating mammary tissue is involved in the secretion of highly concentrated calcium. Therefore, the primary aim of this research is to describe the processes/methodology taken to quantify FAM20A in human milk and identify other proteins involved in calcium metabolism.

methodThis study used mass spectrometry-driven quantitative proteomics: (1) to quantify FAM20A in human milk of three women and (2) to identify proteins associated with calcium regulation by bioinformatic analyses on whole and milk fat globule membrane fractions.

resultsShotgun MS/MS driven proteomics identified FAM20A in whole milk, and subsequent analysis using targeted proteomics also successfully quantified FAM20A in all samples. Combination of sample preparation, fractionation, and LC-MS/MS proteomics analysis generated 136 proteins previously undiscovered in human milk; 21 of these appear to be associated with calcium metabolism.

conclusionUsing mass spectrometry-driven proteomics, we successfully quantified FAM20A from transitional to mature milk and obtained a list of proteins involved in calcium metabolism. Furthermore, we show the value of using a combination of both shotgun and targeted driven proteomics for the identification of this low abundant protein in human milk.

Indexed as

CalciumDental Enamel ProteinsFemaleGene Regulatory NetworksHumansLactationMilk, HumanProteomicsCalciumDental Enamel ProteinsFAM20A protein, humancalcium metabolismenamel renal syndromeFAM20A and human milk

Identifiers

PMID34957696
PMCPMC8711012
OpenAlexW4200199274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.