Evidence map›Paper›PMID 34956864›Full record

ArticleFrontiers in oncology2021

Bulk and Single-Cell Profiling of Breast Tumors Identifies TREM-1 as a Dominant Immune Suppressive Marker Associated With Poor Outcomes.

Ashok K Pullikuth, Eric D Routh, Kip D Zimmerman, Julia Chifman, Jeff W Chou, Michael H Soike, Guangxu Jin, Jing Su, Qianqian Song, Michael A Black and 9 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06950671 (Role of TREM-1 as a Novel Biomarker in HER-2 Negative Breast Cancer), which is not on this map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06950671 not yet recruitingnot on this mapstarted 2025, after this paper: background citation

Role of TREM-1 as a Novel Biomarker in HER-2 Negative Breast Cancer: a Molecular and Clinical Study

TypeobservationalSponsorRahma Esam Salama EsawiRan2025 to 2029Enrolled1ConditionsBreast Cancer Stage I, Breast Cancer Stage II, Breast Cancer Stage III, Breast Cancer Invasive
3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

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  18. CD8Frontiers in immunology · 2024
    Review
  19. LncRNAInternational journal of biological sciences · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 8 institutions in 3 countries.

Ashok K PullikuthDepartment of Cancer Biology, Wake Forest School of Medicine, Winston Salem, NC, United States.
Eric D RouthDepartment of Cancer Biology, Wake Forest School of Medicine, Winston Salem, NC, United States.
Kip D ZimmermanCenter for Precision Medicine, Wake Forest School of Medicine, Winston Salem, NC, United States.
Julia ChifmanDepartment of Cancer Biology, Wake Forest School of Medicine, Winston Salem, NC, United States.
Jeff W ChouDepartment of Biostatistics and Data Science, Wake Forest School of Medicine, Winston Salem, NC, United States.
Michael H SoikeDepartment of Radiation Oncology, University of Alabama-Birmingham, Birmingham, AL, United States.
Guangxu JinDepartment of Cancer Biology, Wake Forest School of Medicine, Winston Salem, NC, United States.
Jing SuDepartment of Biostatistics and Data Science, Wake Forest School of Medicine, Winston Salem, NC, United States.
Qianqian SongDepartment of Cancer Biology, Wake Forest School of Medicine, Winston Salem, NC, United States.
Michael A BlackDepartment of Biochemistry, Otago School of Medical Sciences, University of Otago, Dunedin, New Zealand.
Cristin PrintDepartment of Molecular Medicine and Pathology and Maurice Wilkins Institute, Faculty of Medical and Health Sciences, The University of Auckland, Auckland, New Zealand.
Davide BedognettiCancer Program, Sidra Medicine, Doha, Qatar & Department of Internal Medicine and Medical Specialties, University of Genoa, Genoa, Italy.
Marissa Howard-McNattSurgical Oncology Service, Department of Surgery, Wake Forest School of Medicine, Winston Salem, NC, United States.
Stacey S O'NeillThe Comprehensive Cancer Center of Wake Forest University, Winston Salem, NC, United States.
Alexandra ThomasThe Comprehensive Cancer Center of Wake Forest University, Winston Salem, NC, United States.
Carl D LangefeldDepartment of Biostatistics and Data Science, Wake Forest School of Medicine, Winston Salem, NC, United States.
Alexander B SigalovSignaBlok, Inc. Shrewsbury, MA, United States.
Yong LuThe Comprehensive Cancer Center of Wake Forest University, Winston Salem, NC, United States.
Lance D MillerDepartment of Cancer Biology, Wake Forest School of Medicine, Winston Salem, NC, United States.
Wake Forest University · USAmerican University · USMaurice Wilkins Centre · NZSignaBlok (United States) · USUniversity of Alabama at Birmingham · USUniversity of Genoa · ITUniversity of North Carolina at Chapel Hill · USUniversity of Otago · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTriggering receptor expressed on myeloid cells (TREM)-1 is a key mediator of innate immunity previously associated with the severity of inflammatory disorders, and more recently, the inferior survival of lung and liver cancer patients. Here, we investigated the prognostic impact and immunological correlates of

methodsBreast tumor microarray and RNAseq expression profiles (n=4,364 tumors) were analyzed for associations between gene expression, tumor immune subtypes, distant metastasis-free survival (DMFS) and clinical response to neoadjuvant chemotherapy (NAC). Single-cell (sc)RNAseq was performed using the 10X Genomics platform. Statistical associations were assessed by logistic regression, Cox regression, Kaplan-Meier analysis, Spearman correlation, Student's t-test and Chi-square test.

resultsIn pre-treatment biopsies,

conclusionsTogether, these findings indicate that increased

Indexed as

breast cancercytokinesimmune signatureimmune suppressiontranscriptomicsTREM-1tumor infiltrating myeloid cells

Identifiers

PMID34956864
PMCPMC8692779
OpenAlexW4200574505

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.