Evidence map›Paper›PMID 34954911›Full record

ArticleClinical and translational medicine2021

Cholangiocyte organoids from human bile retain a local phenotype and can repopulate bile ducts in vitro.

Floris J M Roos, Haoyu Wu, Jorke Willemse, Ruby Lieshout, Laura A Muñoz Albarinos, Yik-Yang Kan, Jan-Werner Poley, Marco J Bruno, Jeroen de Jonge, Richard Bártfai and 4 more

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Review
  3. Modeling ischemic-type biliary lesionFrontiers in bioengineering and biotechnology · 2026
    Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Gallbladder cholangiocyte organoids.Biology of the cell · 2025
    Review
  11. Review
  12. Article
  13. Review
  14. Potential Use of Organoids in Regenerative Medicine.Tissue engineering and regenerative medicine · 2024
    Review
  15. Review
  16. Biliary atresia.Nature reviews. Disease primers · 2024
    Review
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 2 countries.

Floris J M RoosErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.ORCID 0000-0003-1278-6517
Haoyu WuDepartment of Molecular Biology, Radboud University, Nijmegen, The Netherlands.
Jorke WillemseErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Ruby LieshoutErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Laura A Muñoz AlbarinosErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Yik-Yang KanErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Jan-Werner PoleyErasmus MC, Department of Gastroenterology and Hepatology, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Marco J BrunoErasmus MC, Department of Gastroenterology and Hepatology, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Jeroen de JongeErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Richard BártfaiDepartment of Molecular Biology, Radboud University, Nijmegen, The Netherlands.
Hendrik MarksDepartment of Molecular Biology, Radboud University, Nijmegen, The Netherlands.ORCID 0000-0002-4198-3731
Jan N M IJzermansErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Monique M A VerstegenErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Luc J W van der LaanErasmus MC, Department of Surgery, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Erasmus MC · NLRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The well-established 3D organoid culture method enabled efficient expansion of cholangiocyte-like cells from intrahepatic (IHBD) and extrahepatic bile duct (EHBD) tissue biopsies. The extensive expansion capacity of these organoids enables various applications, from cholangiocyte disease modelling to bile duct tissue engineering. Recent research demonstrated the feasibility of culturing cholangiocyte organoids from bile, which was minimal-invasive collected via endoscopic retrograde pancreaticography (ERCP). However, a detailed analysis of these bile cholangiocyte organoids (BCOs) and the cellular region of origin was not yet demonstrated. In this study, we characterize BCOs and mirror them to the already established organoids initiated from IHBD- and EHBD-tissue. We demonstrate successful organoid-initiation from extrahepatic bile collected from gallbladder after resection and by ERCP or percutaneous transhepatic cholangiopathy from a variety of patients. BCOs initiated from these three sources of bile all show features similar to in vivo cholangiocytes. The regional-specific characteristics of the BCOs are reflected by the exclusive expression of regional common bile duct genes (HOXB2 and HOXB3) by ERCP-derived BCOs and gallbladder-derived BCOs expressing gallbladder-specific genes. Moreover, BCOs have limited hepatocyte-fate differentiation potential compared to intrahepatic cholangiocyte organoids. These results indicate that organoid-initiating cells in bile are likely of local (extrahepatic) origin and are not of intrahepatic origin. Regarding the functionality of organoid initiating cells in bile, we demonstrate that BCOs efficiently repopulate decellularized EHBD scaffolds and restore the monolayer of cholangiocyte-like cells in vitro. Bile samples obtained through minimally invasive procedures provide a safe and effective alternative source of cholangiocyte organoids. The shedding of (organoid-initiating) cholangiocytes in bile provides a convenient source of organoids for regenerative medicine.

Indexed as

PhenotypeAdolescentAdultAgedBile Acids and SaltsBile DuctsFemaleHumansMaleMiddle AgedOrganoidsBile Acids and Saltsbilecholangiocyte-organoidscholangiocytesERCPextrahepatic bile ductgallbladderregenerationrepopulation

Identifiers

PMID34954911
PMCPMC8710298
OpenAlexW4200354503

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.