Evidence map›Paper›PMID 34950888›Full record

ArticleSTAR protocols2021

Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling.

Marion Aguirrebengoa, David Ohayon

Abstract read
In one paragraph

Article in STAR protocols, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Marion AguirrebengoaBigA Core Facility, Centre de Biologie Intégrative, Université de Toulouse, 118 Route de Narbonne, 31062 Toulouse, France.
David OhayonMolecular, Cellular and Developmental Biology Department (MCD) UMR 5077 CNRS, Centre de Biologie Intégrative (CBI), Université Paul Sabatier, 118 Route de Narbonne, 31062 Toulouse, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from other glial cells by using a double reporter mouse approach and to determine the transcriptome profile of the Olig2-AS from the postnatal spinal cord using RNA-sequencing analysis. For complete details on the use and execution of this protocol, please refer to Ohayon et al. (2021).

Indexed as

AnimalsAstrocytesFlow CytometryMiceMice, TransgenicNeurogliaRNA-SeqSpinal CordTranscriptomeCell BiologyCell isolationFlow Cytometry/Mass CytometryGene ExpressionModel OrganismsNeuroscienceRNAseqSequence analysis

Identifiers

PMID34950888
PMCPMC8672091

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.