Evidence map›Paper›PMID 34948193›Full record

ArticleInternational journal of molecular sciences2021

Identification of Co-Expressed Genes Related to Theacrine Synthesis in Tea Flowers at Different Developmental Stages.

Xiaomin Chen, Shuxian Shao, Ruxing Yang, Mengya Gu, Pengjie Wang, Feng Zhao, Naixing Ye

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Xiaomin ChenCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Shuxian ShaoCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Ruxing YangTea Research Institute, Fujian Academy of Agricultural Sciences, Fuzhou 350012, China.
Mengya GuCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Pengjie WangCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Feng ZhaoCollege of Pharmacy, Fujian University of Traditional Chinese Medicine, Fuzhou 350122, China.ORCID 0000-0003-1814-470X
Naixing YeCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-2955-2813
Fujian Agriculture and Forestry University · CNAgricultural Genomics Institute at Shenzhen · CNFujian Academy of Agricultural Sciences · CNFujian University of Traditional Chinese Medicine · CN

Funding

Fujian Agriculture and Forestry University Construction Project for Technological Innovation  and Service System of  Tea Industry China K1520005A01Fund for Excellent Master's Dissertations of Fujian Agriculture and Forestry University 1122YS01003Special fund for scientific and technological innovation of Fujian Agriculture and Forestry University CXZX2020123BStarting Project of Introducing Talents into Scientific Research in Fujian University of Traditional Chinese Medicine 2801/701190097
6 · The paper itself

Abstract

Jiaocheng kucha is the first reported tea germplasm resource which contains theacrine founded in Fujian Province. Currently, the anabolic mechanism of theacrine within tea leaves is clear, but there are few studies focused on its flowers. In order to further explore the mechanism of theacrine synthesis and related genes in flowers, current study applied Jiaocheng kucha flowers (JC) as test materials and Fuding Dabaicha flowers (FD) as control materials to make transcriptome sequencing, and determination of purine alkaloid content in three different developmental periods (flower bud stage, whitening stage and full opening stage). The results showed that the flower in all stages of JC contained theacrine. The theacrine in the flower bud stage was significantly higher than in the other stages. The differentially expressed genes (DEGs) at three different developmental stages were screened from the transcriptome data, and were in a total of 5642, 8640 and 8465. These DEGs related to the synthesis of theacrine were primarily annotated to the pathways of purine alkaloids. Among them, the number of DEGs in xanthine synthesis pathway was the largest and upregulated in JC, while it was the smallest in caffeine synthesis pathway and downregulated in JC. Further weighted gene co-expression network (WGCNA) indicated that

Indexed as

AlkaloidsBiosynthetic PathwaysCaffeineCamellia sinensisChinaFlowersGene ExpressionGene Expression ProfilingGene Expression Regulation, PlantGene Regulatory NetworksTeaTranscriptomeUric AcidXanthines1,3,7,9-tetramethyluric acidAlkaloidsCaffeineTeaUric AcidXanthinespurine alkaloid pathwaytea flowertheacrinetranscriptomicWGCNA

Identifiers

PMID34948193
PMCPMC8704887
OpenAlexW4200304671

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.