Evidence map›Paper›PMID 34946946›Full record

ArticleGenes2021

Cell-Cycle-Dependent Chromatin Dynamics at Replication Origins.

Yulong Li, Alexander J Hartemink, David M MacAlpine

Open access · goldAbstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Prime Editing in Dividing and Quiescent Cells.International journal of molecular sciences · 2025
    Review
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yulong LiDepartment of Computer Science, Duke University, Durham, NC 27708, USA.
Alexander J HarteminkDepartment of Computer Science, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-1292-2606
David M MacAlpineDepartment of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC 27710, USA.
Duke University · USDuke Medical Center · US

Funding

Chromatin-mediated mechanisms of genome integrityR35GM127062 · NIGMS · DUKE UNIVERSITY · PI David M MacAlpine · 2018 to 2026
$3.7M
Methods to Elucidate the Dynamics of Transcriptional Regulation and ChromatinR35GM141795 · NIGMS · DUKE UNIVERSITY · PI HARTEMINK, ALEXANDER J · 2021 to 2025
$2.1M
Exploring the Role of Dynamic Chromatin Occupancy in Transcriptional RegulationR01GM118551 · NIGMS · DUKE UNIVERSITY · PI HARTEMINK, ALEXANDER J · 2016 to 2019
$1.6M
NIGMS NIH HHS R01 GM118551NIGMS NIH HHS R35 GM127062NIGMS NIH HHS R35 GM141795NIH HHS R35GM127062NIH HHS R35GM141795
6 · The paper itself

Abstract

Origins of DNA replication are specified by the ordered recruitment of replication factors in a cell-cycle-dependent manner. The assembly of the pre-replicative complex in G1 and the pre-initiation complex prior to activation in S phase are well characterized; however, the interplay between the assembly of these complexes and the local chromatin environment is less well understood. To investigate the dynamic changes in chromatin organization at and surrounding replication origins, we used micrococcal nuclease (MNase) to generate genome-wide chromatin occupancy profiles of nucleosomes, transcription factors, and replication proteins through consecutive cell cycles in

Indexed as

Cell CycleCell Cycle ProteinsCell DivisionChromatinDNA ReplicationG1 PhaseNucleosomesReplication OriginSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS PhaseCell Cycle ProteinsChromatinNucleosomesSaccharomyces cerevisiae Proteinscell cyclechromatinDNA replicationreplication origins

Identifiers

PMID34946946
PMCPMC8701747
OpenAlexW4200156210

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.