Evidence map›Paper›PMID 34946564›Full record

ArticleMolecules (Basel, Switzerland)2021

DFT-D4 Insight into the Inclusion of Amphetamine and Methamphetamine in Cucurbit[7]uril: Energetic, Structural and Biosensing Properties.

Abdelkarim Litim, Youghourta Belhocine, Tahar Benlecheb, Monira Galal Ghoniem, Zoubir Kabouche, Fatima Adam Mohamed Ali, Babiker Yagoub Abdulkhair, Mahamadou Seydou, Seyfeddine Rahali

Abstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Abdelkarim LitimLaboratory of Sensors, Instrumentations and Process (LCIP), University of Abbes Laghrour, Khenchela 40000, Algeria.
Youghourta BelhocineDepartment of Petrochemical and Process Engineering, Faculty of Technology, 20 August 1955 University of Skikda, El Hadaik Road, Skikda 21000, Algeria.ORCID 0000-0003-3876-8683
Tahar BenlechebLaboratory of Sensors, Instrumentations and Process (LCIP), University of Abbes Laghrour, Khenchela 40000, Algeria.
Monira Galal GhoniemDepartment of Chemistry, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11432, Saudi Arabia.
Zoubir KaboucheLaboratory of Sensors, Instrumentations and Process (LCIP), University of Abbes Laghrour, Khenchela 40000, Algeria.
Fatima Adam Mohamed AliDepartment of Chemistry, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11432, Saudi Arabia.
Babiker Yagoub AbdulkhairChemistry Department, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11432, Saudi Arabia.ORCID 0000-0002-3372-9944
Mahamadou SeydouUniversité de Paris, CNRS, ITODYS, F-75013 Paris, France.ORCID 0000-0003-2261-8496
Seyfeddine RahaliDepartment of Chemistry, College of Science and Arts, Qassim University, Ar Rass, Saudi Arabia.ORCID 0000-0002-5216-861X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The host-guest interactions of cucurbit[7]uril (CB[7]) as host and amphetamine (AMP), methamphetamine (MET) and their enantiomeric forms (S-form and R-form) as guests were computationally investigated using density functional theory calculations with the recent D4 atomic-charge dependent dispersion corrections. The analysis of energetic, structural and electronic properties with the aid of frontier molecular orbital analysis, charge decomposition analysis (CDA), extended charge decomposition analysis (ECDA) and independent gradient model (IGM) approach allowed to characterize the host-guest interactions in the studied systems. Energetic results indicate the formation of stable non-covalent complexes where R-AMP@CB[7] and S-AMP@CB[7] are more stable thermodynamically than R-MET@CB[7] and S-MET@CB[7] in gas phase while the reverse is true in water solvent. Based on structural analysis, a recognition mechanism is proposed, which suggests that the synergistic effect of van der Waals forces, ion-dipole interactions, intermolecular charge transfer interactions and intermolecular hydrogen bonding is responsible for the stabilization of the complexes. The geometries of the complexes obtained theoretically are in good agreement with the X-ray experimental structures and indicate that the phenyl ring of amphetamine and methamphetamine is deeply buried into the cavity of CB[7] through hydrophobic interactions while the ammonium group remains outside the cavity to establish hydrogen bonds with the portal oxygen atoms of CB[7].

Indexed as

Biosensing TechniquesDensity Functional TheoryAmphetamineBridged-Ring CompoundsCucurbit(n)urilsHydrogen BondingImidazolesMacrocyclic CompoundsMethamphetamineMolecular StructureThermodynamicsAmphetamineBridged-Ring Compoundscucurbit(7)urilCucurbit(n)urilsImidazolesMacrocyclic CompoundsMethamphetamineamphetaminecucurbit[7]urilDFT-D4drug sensinginclusion complexmethamphetamine

Identifiers

PMID34946564
PMCPMC8705717

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.