Evidence map›Paper›PMID 34945322›Full record

ArticleMicromachines2021

Three-Dimensional Semantic Segmentation of Pituitary Adenomas Based on the Deep Learning Framework-nnU-Net: A Clinical Perspective.

Xujun Shu, Yijie Zhou, Fangye Li, Tao Zhou, Xianghui Meng, Fuyu Wang, Zhizhong Zhang, Jian Pu, Bainan Xu

Abstract read
In one paragraph

Article in Micromachines, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Radiomics of pituitary adenoma using computer vision: a review.Medical & biological engineering & computing · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xujun ShuMedical School of Chinese PLA, Beijing 100853, China.
Yijie ZhouSchool of Computer Science, Fudan University, Shanghai 200433, China.
Fangye LiDepartment of Neurosurgery, The First Medical Centre of Chinese PLA General Hospital, Beijing 100853, China.
Tao ZhouDepartment of Neurosurgery, The First Medical Centre of Chinese PLA General Hospital, Beijing 100853, China.
Xianghui MengDepartment of Neurosurgery, The First Medical Centre of Chinese PLA General Hospital, Beijing 100853, China.
Fuyu WangDepartment of Neurosurgery, The First Medical Centre of Chinese PLA General Hospital, Beijing 100853, China.
Zhizhong ZhangDepartment of Neurosurgery, The First Medical Centre of Chinese PLA General Hospital, Beijing 100853, China.
Jian PuInstitute of Science and Technology for Brain Inspired Intelligence, Fudan University, Shanghai 200433, China.
Bainan XuDepartment of Neurosurgery, The First Medical Centre of Chinese PLA General Hospital, Beijing 100853, China.

Funding

Shanghai Municipal Science and Technology Major Project No.2018SHZDZX01
6 · The paper itself

Abstract

This study developed and evaluated nnU-Net models for three-dimensional semantic segmentation of pituitary adenomas (PAs) from contrast-enhanced T1 (T1ce) images, with aims to train a deep learning-based model cost-effectively and apply it to clinical practice.

methodsThis study was conducted in two phases. In phase one, two models were trained with nnUNet using distinct PA datasets. Model 1 was trained with 208 PAs in total, and model 2 was trained with 109 primary nonfunctional pituitary adenomas (NFPA). In phase two, the performances of the two models were investigated according to the Dice similarity coefficient (DSC) in the leave-out test dataset.

resultsBoth models performed well (DSC > 0.8) for PAs with volumes > 1000 mm

conclusionsBoth nnU-Net models showed good segmentation performance for PAs > 1000 mm

Indexed as

deep learningmagnetic resonance imagingmedical image segmentationpituitary adenomas

Identifiers

PMID34945322
PMCPMC8703586

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.