Evidence map›Paper›PMID 34944183›Full record

ArticleAnimals : an open access journal from MDPI2021

Exposure to Oxy-Tetracycline Changes Gut Bacterial Community Composition in Rainbow Trout: A Preliminary Study.

Aritra Roy Choudhury, Ji-Young Park, Do Young Kim, Jeongyun Choi, Satabdi Acharya, Jung-Ho Park

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. First Report ofPathogens (Basel, Switzerland) · 2023
    Article
  4. Impact of Infection withPathogens (Basel, Switzerland) · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Aritra Roy ChoudhuryBio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju 28116, Korea.ORCID 0000-0002-8373-1348
Ji-Young ParkBio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju 28116, Korea.
Do Young KimBio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju 28116, Korea.
Jeongyun ChoiBio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju 28116, Korea.
Satabdi AcharyaDepartment of Bioactive Material Science, College of Natural Science, Jeonbuk National University, Jeonju 54896, Korea.
Jung-Ho ParkBio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju 28116, Korea.ORCID 0000-0003-0441-4457
Korea Research Institute of Bioscience and Biotechnology · KR

Funding

Korea Research Institute of Bioscience and Biotechnology KGM5362113Rural Development Administration PJ01595802
6 · The paper itself

Abstract

The extensive use of antibiotics is evident in most of the livestock and aquaculture management for inhibiting pathogen infection. Korean aquaculture depends on the usage of oxy-tetracycline for growing rainbow trout. Hence, this study was conducted to evaluate the changes in gut bacterial community profiles of rainbow trout exposed to oxy-tetracycline and predict the metabolic functioning of the bacterial community. The gut bacterial community composition of oxy-tetracycline treated fish was assessed by amplicon sequencing targeting the 16S rRNA gene of bacteria and comparing with the control group that did not receive any antibiotic. The principle coordinate analysis and non-metric multidimensional scaling analysis had shown two distinct clusters that implies the changes in community composition. In phyla level, the relative abundances of Tenericutes and Firmicutes were observed to be significantly higher in oxy-tetracycline treated fish compared to the control. Furthermore, the prediction based metabolic profiling revealed the processes that are affected due to the shift in community profiles. For example, metabolic functioning of membrane efflux system, amino acid metabolism and glycolysis were significantly higher in oxy-tetracycline treated fish compared to the control. This study describes alteration in gut bacterial community composition and potential metabolic profiles of the community that might be responsible for surviving in antibiotic rich environment.

Indexed as

antibioticsmetabolic profilesmollicutesoxy-tetracyclineproteobacteriarainbow trouttenericutes

Identifiers

PMID34944183
PMCPMC8698040
OpenAlexW3217457274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.