Evidence map›Paper›PMID 34943925›Full record

ArticleCells2021

First Glimpse at the Diverse Aquaporins of Amphipod Crustaceans.

Andrea Desiderato, Tomasz Mamos, Tomasz Rewicz, Artur Burzynski, Serena Mucciolo

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Andrea DesideratoDepartment of Invertebrate Zoology and Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Łódź, Poland.ORCID 0000-0003-3284-5529
Tomasz MamosDepartment of Invertebrate Zoology and Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Łódź, Poland.ORCID 0000-0002-0524-3015
Tomasz RewiczDepartment of Invertebrate Zoology and Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Łódź, Poland.ORCID 0000-0002-2085-4973
Artur BurzynskiDepartment of Genetics and Marine Biotechnology, Polish Academy of Sciences, Institute of Oceanology, Powstańców Warszawy 55, 81-712 Sopot, Poland.ORCID 0000-0002-0185-197X
Serena MuccioloDepartment of Invertebrate Zoology and Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Łódź, Poland.ORCID 0000-0003-0193-6831
University of Łódź · PLInstytut Oceanologii Polskiej Akademii Nauk · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The importance of aquaporins (AQPs) in the transport of water and solutes through cell membranes is well recognized despite being relatively new. To date, despite their abundance, diversity, and presence in disparate environments, amphipods have only been mentioned in studies about the AQPs of other animals and have never been further investigated. In this work, we aimed to recover from public data available AQPs of these crustaceans and reconstruct phylogenetic affinities. We first performed BLAST searches with several queries of diverse taxa against different NCBI databases. Then, we selected the clades of AQPs retrieving the amphipod superfamily Gammaroidea as monophyletic and ran phylogenetic analyses to assess their performances. Our results show how most of the AQPs of amphipods are similar to those of other crustaceans, despite the Prip-like displayed different paralogs, and report for the first time a putative Aqp8-like for arthropods. We also found that the candidate genes of Prip-like, Bib-like, Aqp12-like, and Glp-like help solve deeper relationships in phylogenies of amphipods while leaving uncertainties in shallower parts. With our findings, we hope to increase attention to the study of amphipods as models for AQP functioning and evolution.

Indexed as

Amino Acid MotifsAmino Acid SequenceAmphipodaAnimalsAquaporinsConserved SequenceHumansLikelihood FunctionsPhylogenyProtein Structure, SecondaryAquaporinsamphipodsAqp12Aqp8BibevolutionGlpin silicoPrip

Identifiers

PMID34943925
PMCPMC8699810
OpenAlexW4200278467

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.