Evidence map›Paper›PMID 34943612›Full record

ArticleDiagnostics (Basel, Switzerland)2021

Development and Validation of a Targeted 'Liquid' NGS Panel for Treatment Customization in Patients with Metastatic Colorectal Cancer.

Myrto Kastrisiou, George Zarkavelis, Anastasia Kougioumtzi, Prodromos Sakaloglou, Charilaos Kostoulas, Ioannis Georgiou, Anna Batistatou, George Pentheroudakis, Angeliki Magklara

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Myrto KastrisiouDepartment of Clinical Chemistry, Faculty of Medicine, University of Ioannina, 45110 Ioannina, Greece.
George ZarkavelisDepartment of Medical Oncology, University General Hospital of Ioannina, 45500 Ioannina, Greece.ORCID 0000-0001-5961-2237
Anastasia KougioumtziDepartment of Clinical Chemistry, Faculty of Medicine, University of Ioannina, 45110 Ioannina, Greece.
Prodromos SakaloglouLaboratory of Medical Genetics in Clinical Practice, Faculty of Medicine, University of Ioannina, 45110 Ioannina, Greece.ORCID 0000-0002-2455-656X
Charilaos KostoulasLaboratory of Medical Genetics in Clinical Practice, Faculty of Medicine, University of Ioannina, 45110 Ioannina, Greece.ORCID 0000-0002-0769-0257
Ioannis GeorgiouLaboratory of Medical Genetics in Clinical Practice, Faculty of Medicine, University of Ioannina, 45110 Ioannina, Greece.
Anna BatistatouDepartment of Pathology, Faculty of Medicine, University of Ioannina, 45500 Ioannina, Greece.
George PentheroudakisDepartment of Medical Oncology, University General Hospital of Ioannina, 45500 Ioannina, Greece.
Angeliki MagklaraDepartment of Clinical Chemistry, Faculty of Medicine, University of Ioannina, 45110 Ioannina, Greece.ORCID 0000-0003-3408-6722
University of Ioannina · GRHellenic Society for the Study of Bone Metabolism · GR

Funding

European Regional Development Fund of the European Union and Greek National Funds through the Operational Program Competitiveness, Entrepreneurship, and Innovation under the call RE-SEARCH - CREATE - INNOVATE MIS 5067570
6 · The paper itself

Abstract

The detection of actionable mutations in tumor tissue is a prerequisite for treatment customization in patients with metastatic colorectal cancer (mCRC). Analysis of circulating tumor DNA (ctDNA) for the identification of such mutations in patients' plasma is an attractive alternative to invasive tissue biopsies. Despite having the high analytical sensitivity required for ctDNA analysis, digital polymerase chain reaction (dPCR) technologies can only detect a very limited number of hotspot mutations, whilst a broader mutation panel is currently needed for clinical decision making. Recent advances in next-generation sequencing (NGS) have led to high-sensitivity platforms that allow screening of multiple genes at a single assay. Our goal was to develop a small, cost- and time-effective NGS gene panel that could be easily integrated in the day-to-day clinical routine in the management of patients with mCRC. We designed a targeted panel comprising hotspots in six clinically relevant genes (

Indexed as

circulating tumor DNA (ctDNA)digital polymerase chain reaction (digital PCR)liquid biopsiesmetastatic colorectal cancernext-generation sequencing (NGS)targeted sequencing

Identifiers

PMID34943612
PMCPMC8700616
OpenAlexW4200322089

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.