Evidence map›Paper›PMID 34942363›Full record

ArticleNeuroImage2022

Filtering respiratory motion artifact from resting state fMRI data in infant and toddler populations.

Sydney Kaplan, Dominique Meyer, Oscar Miranda-Dominguez, Anders Perrone, Eric Earl, Dimitrios Alexopoulos, Deanna M Barch, Trevor K M Day, Joseph Dust, Adam T Eggebrecht and 10 more

Abstract read
In one paragraph

Article in NeuroImage, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Considerations for conducting developmental neuroimaging research on mental health topics.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026
    Review
  6. Functional Magnetic Resonance Imaging in Awake Infants: Insights From More Than 750 Scanning Sessions.Infancy : the official journal of the International Society on Infant Studies · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Sydney KaplanDepartment of Neurology, Washington University School of Medicine, St. Louis, MO, USA. Electronic address: sydney.kaplan@wustl.edu.
Dominique MeyerDepartment of Neurology, Washington University School of Medicine, St. Louis, MO, USA.
Oscar Miranda-DominguezDepartment of Pediatrics, University of Minnesota, Minneapolis, MN, USA; Masonic Institute for the Developing Brain, University of Minnesota, Minneapolis, MN, USA.
Anders PerroneInstitute of Child Development, University of Minnesota, Minneapolis, MN, USA; Department of Psychiatry, Oregon Health and Science University, Portland, OR, USA.
Eric EarlMasonic Institute for the Developing Brain, University of Minnesota, Minneapolis, MN, USA; Department of Psychiatry, Oregon Health and Science University, Portland, OR, USA.
Dimitrios AlexopoulosDepartment of Neurology, Washington University School of Medicine, St. Louis, MO, USA.
Deanna M BarchDepartment of Radiology, Washington University School of Medicine, St. Louis, MO, USA; Department of Psychiatry, Washington University School of Medicine, St. Louis, MO, USA; Department of Psychological and Brain Sciences, Washington University School of Medicine, St. Louis, MO, USA.
Trevor K M DayInstitute of Child Development, University of Minnesota, Minneapolis, MN, USA.
Joseph DustDepartment of Neurology, Washington University School of Medicine, St. Louis, MO, USA.
Adam T EggebrechtDepartment of Radiology, Washington University School of Medicine, St. Louis, MO, USA.
Eric FeczkoDepartment of Pediatrics, University of Minnesota, Minneapolis, MN, USA; Masonic Institute for the Developing Brain, University of Minnesota, Minneapolis, MN, USA.
Omid KardanDepartment of Psychology, University of Chicago, Chicago, IL, USA.
Jeanette K KenleyDepartment of Neurology, Washington University School of Medicine, St. Louis, MO, USA.
Cynthia E RogersDepartment of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA; Department of Psychiatry, Washington University School of Medicine, St. Louis, MO, USA.
Muriah D WheelockDepartment of Radiology, Washington University School of Medicine, St. Louis, MO, USA.
Essa YacoubCenter for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA.
Monica RosenbergDepartment of Psychology, University of Chicago, Chicago, IL, USA.
Jed T ElisonInstitute of Child Development, University of Minnesota, Minneapolis, MN, USA; Department of Pediatrics, University of Minnesota, Minneapolis, MN, USA; Masonic Institute for the Developing Brain, University of Minnesota, Minneapolis, MN, USA.
Damien A FairInstitute of Child Development, University of Minnesota, Minneapolis, MN, USA; Department of Pediatrics, University of Minnesota, Minneapolis, MN, USA; Masonic Institute for the Developing Brain, University of Minnesota, Minneapolis, MN, USA; Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA.
Christopher D SmyserDepartment of Neurology, Washington University School of Medicine, St. Louis, MO, USA; Department of Radiology, Washington University School of Medicine, St. Louis, MO, USA; Department of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA.

Funding

Research Education ComponentP30AG066444 · NIA · WASHINGTON UNIVERSITY · PI DAVID M. HOLTZMAN · 2020 to 2026
$28.7M
Early Life Adversity, Biological Embedding, and Risk for Developmental Precursors of Mental DisordersR01MH113883 · NIMH · WASHINGTON UNIVERSITY · PI JOAN L. LUBY, Christopher Daniel Smyser · 2018 to 2026
$20.6M
WUIDDRC Supplement-Supporting the health and well-being of children with intellectual and developmental disability during COVID-19 pandemicP50HD103525 · NICHD · WASHINGTON UNIVERSITY · PI JOSEPH D DOUGHERTY, Natasha Marrus · 2020 to 2026
$15.5M
Pre- and Postnatal Exposure Periods for Child Health: Common Risks and Shared MechanismsUG3OD023349 · OD · UNIVERSITY OF ROCHESTER · PI BARRETT, EMILY S, MILLER, RICHARD KERMIT · 2016 to 2024
$7.0M
UNC/UMN Baby Connectome ProjectU01MH110274 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ELISON, JED THOMAS, GILMORE, JOHN HORACE · 2016 to 2019
$4.5M
Brain trajectories in ADHDR01MH115357 · NIMH · OREGON HEALTH & SCIENCE UNIVERSITY · PI FAIR, DAMIEN A, NIGG, JOEL T · 2017 to 2021
$3.8M
Intergenerational Effects of Maternal Childhood Trauma on the Fetal BrainR01MH105538 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI BUSS, CLAUDIA, FAIR, DAMIEN A · 2015 to 2019
$3.5M
Infant Brain and Behavioral Signatures of Later Emerging Risk for PsychopathologyR01MH104324 · NIMH · UNIVERSITY OF MINNESOTA · PI ELISON, JED THOMAS · 2014 to 2018
$2.6M
2/7: Longitudinal evaluation of the impact of the COVID-19 pandemic on high-risk new and expectant mothersR34DA050291 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI FAIR, DAMIEN A, GRAHAM, ALICE M · 2019 to 2021
$977k
Innovative biostatistical approaches to network level analyses of connectome-behavior relationshipsR00EB029343 · NIBIB · WASHINGTON UNIVERSITY · PI WHEELOCK, MURIAH D · 2022 to 2024
$955k
Gates Foundation INV-015711NIA NIH HHS P30 AG066444NIBIB NIH HHS R00 EB029343NICHD NIH HHS P50 HD103525NIDA NIH HHS R34 DA050291NIH HHS UG3 OD023349NIMH NIH HHS R01 MH104324NIMH NIH HHS R01 MH105538NIMH NIH HHS R01 MH113883NIMH NIH HHS R01 MH115357NIMH NIH HHS U01 MH110274
6 · The paper itself

Abstract

The importance of motion correction when processing resting state functional magnetic resonance imaging (rs-fMRI) data is well-established in adult cohorts. This includes adjustments based on self-limited, large amplitude subject head motion, as well as factitious rhythmic motion induced by respiration. In adults, such respiration artifact can be effectively removed by applying a notch filter to the motion trace, resulting in higher amounts of data retained after frame censoring (e.g., "scrubbing") and more reliable correlation values. Due to the unique physiological and behavioral characteristics of infants and toddlers, rs-fMRI processing pipelines, including methods to identify and remove colored noise due to subject motion, must be appropriately modified to accurately reflect true neuronal signal. These younger cohorts are characterized by higher respiration rates and lower-amplitude head movements than adults; thus, the presence and significance of comparable respiratory artifact and the subsequent necessity of applying similar techniques remain unknown. Herein, we identify and characterize the consistent presence of respiratory artifact in rs-fMRI data collected during natural sleep in infants and toddlers across two independent cohorts (aged 8-24 months) analyzed using different pipelines. We further demonstrate how removing this artifact using an age-specific notch filter allows for both improved data quality and data retention in measured results. Importantly, this work reveals the critical need to identify and address respiratory-driven head motion in fMRI data acquired in young populations through the use of age-specific motion filters as a mechanism to optimize the accuracy of measured results in this population.

Indexed as

MotionArtifactsConnectomeFemaleHead MovementsHumansImage Processing, Computer-AssistedInfantMagnetic Resonance ImagingMaleNeuroimagingRespirationSleepNeurodevelopmentNeuroimaging, infantRespiratory filteringResting-state fMRI

Identifiers

PMID34942363
PMCPMC8803544

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.