ArticleFEMS microbiology ecology2022
Site and land-use associations of soil bacteria and fungi define core and indicative taxa.
Article in FEMS microbiology ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- EntomopathogenicApplied and environmental microbiology · 2026Article
- Habitat Type and Locality Structure the Midgut Microbiota of Aedes albopictus.Microbial ecology · 2026Article
- Relationship between land use type and bacterial composition in adjacent streams and riparian zones.PloS one · 2026Article
- Genomic and phenotypic insights into the expanding phylogenetic landscape of the Cryptococcus genus.PLoS genetics · 2025Article
- Genomic and phenotypic insights into the expanding phylogenetic landscape of thebioRxiv : the preprint server for biology · 2025Article
- Farming System and Nematodes Affect the Rhizosphere Microbiome of Tropical Banana Plants.Environmental microbiology reports · 2025Article
- Soil microbial communities are more disrupted by extreme drought than by gradual climate shifts under different land-use intensities.Frontiers in microbiology · 2025Article
- Article
- Plant G × Microbial E: Plant Genotype Interaction with Soil Bacterial Community Shapes Rhizosphere Composition During Invasion.Microbial ecology · 2024Article
- Soil bacterial communities affected by land-use types in a small catchment area of the Balaton Uplands (Hungary).Biologia futura · 2024Article
- Imprints of ecological processes in the taxonomic core community: an analysis of naturally replicated microbial communities enclosed in oil.FEMS microbiology ecology · 2024Article
- Microbial activity contributes to spatial heterogeneity of wetland methane fluxes.Microbiology spectrum · 2023Article
- Patterns in soil microbial diversity across Europe.Nature communications · 2023Article
- Humate application alters microbiota-mineral interactions and assists in pasture dieback recovery.Heliyon · 2023Article
- Microbial community structural and functional differentiation in capped thickened oil sands tailings planted with native boreal species.Frontiers in microbiology · 2023Article
- Microbial involvement in iodine cycle: mechanisms and potential applications.Frontiers in bioengineering and biotechnology · 2023Review
- The core bacteriobiome of Côte d'Ivoire soils across three vegetation zones.Frontiers in microbiology · 2023Review
- Irrigation water salinity structures the bacterial communities of date palm (Frontiers in plant science · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Soil microbial diversity has major influences on ecosystem functions and services. However, due to its complexity and uneven distribution of abundant and rare taxa, quantification of soil microbial diversity remains challenging and thereby impeding its integration into long-term monitoring programs. Using metabarcoding, we analyzed soil bacterial and fungal communities at 30 long-term soil monitoring sites from the three land-use types arable land, permanent grassland, and forest with a yearly sampling between snowmelt and first fertilization over five years. Unlike soil microbial biomass and alpha-diversity, microbial community compositions and structures were site- and land-use-specific with CAP reclassification success rates of 100%. The temporally stable site core communities included 38.5% of bacterial and 33.1% of fungal OTUs covering 95.9% and 93.2% of relative abundances. We characterized bacterial and fungal core communities and their land-use associations at the family-level. In general, fungal families revealed stronger land-use associations as compared to bacteria. This is likely due to a stronger vegetation effect on fungal core taxa, while bacterial core taxa were stronger related to soil properties. The assessment of core communities can be used to form cultivation-independent reference lists of microbial taxa, which may facilitate the development of microbial indicators for soil quality and the use of soil microbiota for long-term soil biomonitoring.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.