ArticleScience China. Life sciences2022
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum.
Article in Science China. Life sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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36 citing papers in PubMed, 75 citations in OpenAlex.
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- Chromosome-level genome assembly of the alpine extremophyte Tibetan snow lotus, Saussurea hypsipeta Diels.Scientific data · 2026Article
- Phylogenomic synteny reveals paleohexaploid-derived genomic blocks across Asteraceae.Proceedings of the National Academy of Sciences of the United States of America · 2026Article
- Workflow for Gene Overexpression and Phenotypic Characterisation inMethods and protocols · 2026Article
- Simultaneous Knockout of Tk1-SST and Tk1-FFT via CRISPR/Cas9 Enhances the Natural Rubber Accumulation in Taraxacum kok-saghyz.Plant biotechnology journal · 2025Article
- Geranyl Diphosphate Synthases GDS 1 and GDS7 Facilitate Natural Rubber Biosynthesis inPlants (Basel, Switzerland) · 2025Article
- TkSRPP3/4 interactors TkGGR1 and TkLIL3 link plastid-like organelles with isoprenoid metabolism in Taraxacum koksaghyz latex.Plant cell reports · 2025Article
- Rubber biosynthesis drives the biogenesis and development of rubber particles, the rubber-producing organelles.Plant biotechnology journal · 2025Article
- Roles of rubber elongation factor and small rubber particle protein in rubber particles.Plant molecular biology · 2025Review
- Article
- Identification and characterization of the TmSnRK2 family proteins related to chicoric acid biosynthesis in Taraxacum mongolicum.BMC genomics · 2025Article
- TmCOP1-TmHY5 module-mediated blue light signal promotes chicoric acid biosynthesis in Taraxacum mongolicum.Plant biotechnology journal · 2025Article
- Genome-Wide Analysis of the Cis-Prenyltransferase (CPT) Gene Family inPlants (Basel, Switzerland) · 2025Article
- Article
- Genome-Wide Identification of the Geranylgeranyl Pyrophosphate Synthase (GGPS) Gene Family Associated with Natural Rubber Synthesis inPlants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification and Characterization of thePlants (Basel, Switzerland) · 2024Article
- Genome-wide identification of oxidosqualene cyclase genes regulating natural rubber in Taraxacum kok-saghyz.Planta · 2024Article
- Pan-genome and phylogenomic analyses highlight Hevea species delineation and rubber trait evolution.Nature communications · 2024Article
- Article
- Genome-Wide Analysis of theInternational journal of molecular sciences · 2024Article
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Authors and funding
20 authors at 7 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plants belonging to the genus Taraxacum are widespread all over the world, which contain rubber-producing and non-rubber-producing species. However, the genomic basis underlying natural rubber (NR) biosynthesis still needs more investigation. Here, we presented high-quality genome assemblies of rubber-producing T. kok-saghyz TK1151 and non-rubber-producing T. mongolicum TM5. Comparative analyses uncovered a large number of genetic variations, including inversions, translocations, presence/absence variations, as well as considerable protein divergences between the two species. Two gene duplication events were found in these two Taraxacum species, including one common ancestral whole-genome triplication and one subsequent round of gene amplification. In genomes of both TK1151 and TM5, we identified the genes encoding for each step in the NR biosynthesis pathway and found that the SRPP and CPT gene families have experienced a more obvious expansion in TK1151 compared to TM5. This study will have large-ranging implications for the mechanism of NR biosynthesis and genetic improvement of NR-producing crops.
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