Evidence map›Paper›PMID 34938613›Full record

ArticleApplications in plant sciences

A dormant resource for genome size estimation in ferns: C-value inference of the Ophioglossaceae using herbarium specimen spores.

Li-Yaung Kuo, Sheng Kai Tang, Tzu-Tong Kao, Atsushi Ebihara, Susan Fawcett, Min-Chien Hsiao, Wataru Shinohara, Benjamin Dauphin

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Article in Applications in plant sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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6citing papers in PubMed
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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Genomic C-Value Variation Analysis in Jujube (Plants (Basel, Switzerland) · 2023
    Article
  4. Article
  5. Article
  6. Article
4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Li-Yaung KuoInstitute of Molecular and Cellular Biology National Tsing Hua University Hsinchu City Taiwan.ORCID 0000-0002-3388-3757
Sheng Kai TangInstitute of Molecular and Cellular Biology National Tsing Hua University Hsinchu City Taiwan.ORCID 0000-0003-3399-2643
Tzu-Tong KaoDepartment of Biology Duke University Durham North Carolina USA.ORCID 0000-0003-1372-7324
Atsushi EbiharaDepartment of Botany National Museum of Nature and Science, Tsukuba Ibaraki Japan.ORCID 0000-0002-7380-3598
Susan FawcettUniversity and Jepson Herbaria, University of California, Berkeley California USA.ORCID 0000-0001-5021-1779
Min-Chien HsiaoInstitute of Ecology and Evolutionary Biology National Taiwan University Taipei City Taiwan.
Wataru ShinoharaFaculty of Education Kagawa University, Takamatsu Kagawa Japan.
Benjamin DauphinSwiss Federal Research Institute WSL Birmensdorf Switzerland.ORCID 0000-0003-0982-4252

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

premiseThe great variation of genome size (C-value) across land plants is linked to various adaptative features. Flow cytometry (FCM), the standard approach to estimating C-values, relies mostly on fresh materials, performing poorly when used with herbarium materials. No fern C-value reports have been derived from herbarium specimens; however, the herbarium spores of some ferns remain highly viable for decades and are thus promising for further investigation. To explore this possibility, we evaluated herbarium spore collections of Ophioglossaceae ferns using FCM.

methodsFlow cytometry was conducted on 24 spore samples, representing eight of the 12 genera of the Ophioglossaceae, using specimens ranging in age from 2.6 to 111 years obtained from five herbaria.

resultsRegardless of the genus or the source herbarium, high-quality C-value data were generated from 17 samples, with the oldest being 26 years old. Estimates of the C-values from sporophytic tissues of known ploidy did not reveal any evidence of apomixis for the species surveyed here. We also detected a pronounced genome downsizing in DISCUSSION: The recent success of FCM for C-value estimation using spores provides a much more convenient method of utilizing "dry" refrigerated materials. We demonstrate here that herbarium spores of some ferns are also promising for this use, even for older specimens.

Indexed as

apomixisC‐valueflow cytometrygenome downsizinggenome sizeOphioglossaceaepolyploidSceptridium

Identifiers

PMID34938613
PMCPMC8664048

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