Evidence map›Paper›PMID 34937194›Full record

ArticleMicrobiology spectrum2021

Biosafety and Proteome Profiles of Different Heat Inactivation Methods for Mycobacterium tuberculosis.

Cheng-Hui Wang, Denise Utami Putri, Jau-Ching Lee, Chi-Chih Liao, Sung-Tzu Tsao, Ai-Lin Hsiao, Jhao-Hui Wu, Xiao-Wei Chen, Chih-Hsin Lee, I-Lin Tsai

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Cheng-Hui WangDepartment of Laboratory Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Denise Utami PutriPulmonary Research Center, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Jau-Ching LeeDepartment of Laboratory Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Chi-Chih LiaoDepartment of Laboratory Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Sung-Tzu TsaoDepartment of Laboratory Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Ai-Lin HsiaoDepartment of Laboratory Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Jhao-Hui WuDepartment of Laboratory Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Xiao-Wei ChenDivision of Pulmonary Medicine, Department of Internal Medicine, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Chih-Hsin LeePulmonary Research Center, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
I-Lin TsaiPulmonary Research Center, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan.ORCID 0000-0002-3951-5197
Wan Fang Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studies involving the pathogenic organism Mycobacterium tuberculosis routinely require advanced biosafety laboratory facilities, which might not be readily available in rural areas where tuberculosis burdens are high. Attempts to adapt heat inactivation techniques have led to inconsistent conclusions, and the risk of protein denaturation due to extensive heating is impractical for subsequent mass spectrometry (MS)-based protein analyses. In this study, 240 specimens with one or two loops of M. tuberculosis strain H37Rv biomass and specific inactivated solutions were proportionally assigned to six heat inactivation methods in a thermal block at 80°C and 95°C for 20, 30, and 90 min. Twenty untreated specimens served as a positive control, and bacterial growth was followed up for 12 weeks. Our results showed that 90 min of heat inactivation was necessary for samples with two loops of biomass. Further protein extraction and a matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) MS assay demonstrated adequate scores for bacterial identification (≥1.7), with the highest score achieved in the 80°C/90 min and 95°C/30 min treatment groups. A proteomics study also confidently identified 648 proteins with ∼93% to 96% consistent protein abundances following heating at 95°C for 20, 30, and 90 min. Heat inactivation at 95°C for 90 min yielded the most quantifiable proteins, and a functional analysis revealed proteins located in the ribosomal subunit. In summary, we proposed a heat inactivation method for the M. tuberculosis strain H37Rv and studied the preservation of protein components for subsequent bacterial identification and protein-related assays.

Indexed as

Containment of BiohazardsDrug Resistance, BacterialHot TemperatureHumansMass SpectrometryMicrobial ViabilityMycobacterium tuberculosisProteomeProteomicsTuberculosisProteomebiosafetyheat inactivationmass spectrometryMycobacterium tuberculosisproteomics

Identifiers

PMID34937194
PMCPMC8694153
OpenAlexW4200218101

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.