Evidence map›Paper›PMID 34933939›Full record

ArticleGenome research2022

Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers.

Aneta Mikulasova, Daniel Kent, Marco Trevisan-Herraz, Nefeli Karataraki, Kent T M Fung, Cody Ashby, Agata Cieslak, Shmuel Yaccoby, Frits van Rhee, Maurizio Zangari and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Evolutionarily conserved enhancer-associated features within theFrontiers in cell and developmental biology · 2024
    Article
  11. Targeting super-enhancer activity for colorectal cancer therapy.American journal of translational research · 2024
    Review
  12. Review
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 9 institutions in 4 countries.

Aneta MikulasovaBiosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.ORCID http://orcid.org/0000-0003-3842-512X
Daniel KentBiosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.
Marco Trevisan-HerrazBiosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.
Nefeli KaratarakiTranslational and Clinical Research Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.
Kent T M FungTranslational and Clinical Research Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.
Cody AshbyDepartment of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.ORCID http://orcid.org/0000-0002-9361-0283
Agata CieslakUniversité de Paris (Descartes), Institut Necker-Enfants Malades (INEM), Institut National de la Santé et de la Recherche Médicale (Inserm) U1151, and Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, 75015 Paris, France.ORCID http://orcid.org/0000-0003-1015-9448
Shmuel YaccobyMyeloma Center, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Frits van RheeMyeloma Center, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Maurizio ZangariMyeloma Center, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Sharmilan ThanendrarajanMyeloma Center, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Carolina SchinkeMyeloma Center, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Gareth J MorganNYU Langone Medical Center, Perlmutter Cancer Center, NYU Langone Health, New York, New York 10016, USA.
Vahid AsnafiUniversité de Paris (Descartes), Institut Necker-Enfants Malades (INEM), Institut National de la Santé et de la Recherche Médicale (Inserm) U1151, and Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, 75015 Paris, France.
Salvatore SpicugliaAix-Marseille University, Inserm, Theories and Approaches of Genomic Complexity (TAGC), UMR1090, 13288 Marseille, France.ORCID http://orcid.org/0000-0002-8101-7108
Chris A BrackleySUPA, School of Physics and Astronomy, University of Edinburgh, Edinburgh EH9 3FD, United Kingdom.ORCID http://orcid.org/0000-0002-5973-8179
Anne E CorcoranLymphocyte Signalling and Development Programme, Babraham Institute, Cambridge CB22 3AT, United Kingdom.
Sophie HambletonTranslational and Clinical Research Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.
Brian A WalkerMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology Oncology, Indiana University, Indianapolis, Indiana 46202, USA.ORCID http://orcid.org/0000-0002-8615-6254
Daniel Rico *Biosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.
Lisa J Russell *Translational and Clinical Research Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, United Kingdom.ORCID http://orcid.org/0000-0002-3421-3288
University of Arkansas for Medical Sciences · USClinical Research Institute · USInserm · FRNewcastle University · GBBabraham Institute · GBIndiana University Health · USNewcastle upon Tyne Hospitals NHS Foundation Trust · GBNYU Langone Health · USUniversity of Edinburgh · GB

Funding

Wellcome Trust 207556/Z/17/Z
6 · The paper itself

Abstract

Chromosomal translocations are important drivers of haematological malignancies whereby proto-oncogenes are activated by juxtaposition with enhancers, often called

Indexed as

EpigenomicsTranslocation, GeneticChromatinHistonesHumansOncogenesChromatinhistone H3 trimethyl Lys4Histones

Identifiers

PMID34933939
PMCPMC9341503
OpenAlexW4226083537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.