Evidence map›Paper›PMID 34933587›Full record

ArticleApplied spectroscopy2022

Critical Evaluation of Spectral Resolution Enhancement Methods for Raman Hyperspectra.

H Georg Schulze, Shreyas Rangan, Martha Z Vardaki, Michael W Blades, Robin F B Turner, James M Piret

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Article in Applied spectroscopy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

H Georg SchulzeMonte do Tojal, Hortinhas, Terena (São Pedro), Portugal.
Shreyas RanganMichael Smith Laboratories, 8166The University of British Columbia, Vancouver, BC, Canada.ORCID https://orcid.org/0000-0001-8614-3894
Martha Z VardakiDepartment of Medical Physics, School of Health Sciences, 69156University of Ioannina, Ioannina, Greece.ORCID https://orcid.org/0000-0002-9624-8363
Michael W BladesDepartment of Chemistry, 8166The University of British Columbia, Vancouver, BC, Canada.
Robin F B TurnerMichael Smith Laboratories, 8166The University of British Columbia, Vancouver, BC, Canada.ORCID https://orcid.org/0000-0001-6786-7125
James M PiretMichael Smith Laboratories, 8166The University of British Columbia, Vancouver, BC, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Overlapping peaks in Raman spectra complicate the presentation, interpretation, and analyses of complex samples. This is particularly problematic for methods dependent on sparsity such as multivariate curve resolution and other spectral demixing as well as for two-dimensional correlation spectroscopy (2D-COS), multisource correlation analysis, and principal component analysis. Though software-based resolution enhancement methods can be used to counter such problems, their performances often differ, thereby rendering some more suitable than others for specific tasks. Furthermore, there is a need for automated methods to apply to large numbers of varied hyperspectral data sets containing multiple overlapping peaks, and thus methods ideally suitable for diverse tasks. To investigate these issues, we implemented three novel resolution enhancement methods based on pseudospectra, over-deconvolution, and peak fitting to evaluate them along with three extant methods: node narrowing, blind deconvolution, and the general-purpose peak fitting program Fityk. We first applied the methods to varied synthetic spectra, each consisting of nine overlapping Voigt profile peaks. Improved spectral resolution was evaluated based on several criteria including the separation of overlapping peaks and the preservation of true peak intensities in resolution-enhanced spectra. We then investigated the efficacy of these methods to improve the resolution of measured Raman spectra. High resolution spectra of glucose acquired with a narrow spectrometer slit were compared to ones using a wide slit that degraded the spectral resolution. We also determined the effects of the different resolution enhancement methods on 2D-COS and on chemical contrast image generation from mammalian cell spectra. We conclude with a discussion of the particular benefits, drawbacks, and potential of these methods. Our efforts provided insight into the need for effective resolution enhancement approaches, the feasibility of these methods for automation, the nature of the problems currently limiting their use, and in particular those aspects that need improvement.

Indexed as

SoftwareSpectrum Analysis, RamanAnimalsPrincipal Component Analysisblind deconvolutionchemical contrast imagesFitykmoving window multiple peak fittingnode narrowingover-deconvolutionpseudospectraRaman spectroscopyresolution enhancementtwo-dimensional correlation spectroscopy

Identifiers

PMID34933587
PMCPMC8750138

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.