Evidence map›Paper›PMID 34933176›Full record

ArticleVirology2022

Analysis of a crucial interaction between the coronavirus nucleocapsid protein and the major membrane-bound subunit of the viral replicase-transcriptase complex.

Cheri A Koetzner, Kelley R Hurst-Hess, Lili Kuo, Paul S Masters

Abstract read
In one paragraph

Article in Virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
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  15. Assembly of SARS-CoV-2 ribonucleosomes by truncated NThe Journal of biological chemistry · 2023
    Article
  16. Article
  17. Article
  18. Nsp3-N interactions are critical for SARS-CoV-2 fitness and virulence.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Cheri A KoetznerLaboratory of Viral Replication and Vector Biology, Wadsworth Center, New York State Department of Health, Slingerlands, NY, 12159, USA.
Kelley R Hurst-HessLaboratory of Viral Replication and Vector Biology, Wadsworth Center, New York State Department of Health, Slingerlands, NY, 12159, USA.
Lili KuoLaboratory of Viral Replication and Vector Biology, Wadsworth Center, New York State Department of Health, Slingerlands, NY, 12159, USA.
Paul S MastersLaboratory of Viral Replication and Vector Biology, Wadsworth Center, New York State Department of Health, Slingerlands, NY, 12159, USA; Department of Biomedical Sciences, School of Public Health, State University of New York, Albany, NY, 12208, USA. Electronic address: Paul.Masters@health.ny.gov.

Funding

Genetic Analysis of Molecular Interactions in Coronavirus ReplicationR01AI064603 · NIAID · WADSWORTH CENTER · PI MASTERS, PAUL SCOTT · 2005 to 2015
$4.7M
NIAID NIH HHS R01 AI064603
6 · The paper itself

Abstract

The coronavirus nucleocapsid (N) protein comprises two RNA-binding domains connected by a central spacer, which contains a serine- and arginine-rich (SR) region. The SR region engages the largest subunit of the viral replicase-transcriptase, nonstructural protein 3 (nsp3), in an interaction that is essential for efficient initiation of infection by genomic RNA. We carried out an extensive genetic analysis of the SR region of the N protein of mouse hepatitis virus in order to more precisely define its role in RNA synthesis. We further examined the N-nsp3 interaction through construction of nsp3 mutants and by creation of an interspecies N protein chimera. Our results indicate a role for the central spacer as an interaction hub of the N molecule that is partially regulated by phosphorylation. These findings are discussed in relation to the recent discovery that nsp3 forms a molecular pore in the double-membrane vesicles that sequester the coronavirus replicase-transcriptase.

Indexed as

Amino Acid MotifsAnimalsCell LineCoronavirus Nucleocapsid ProteinsCoronavirus RNA-Dependent RNA PolymeraseIntracellular MembranesMiceMurine hepatitis virusMutationProtein BindingProtein DomainsRNA, ViralViral Replicase Complex ProteinsViral Replication CompartmentsCoronavirus Nucleocapsid ProteinsCoronavirus RNA-Dependent RNA PolymeraseRNA, ViralViral Replicase Complex ProteinsCoronavirusMouse hepatitis virusNonstructural protein 3Nucleocapsid proteinViral genomic RNAViral RNA synthesis

Identifiers

PMID34933176
PMCPMC8669624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.