Evidence map›Paper›PMID 34927194›Full record

ArticleDisease models & mechanisms2022

Analysis of the H-Ras mobility pattern in vivo shows cellular heterogeneity inside epidermal tissue.

Radoslaw J Gora, Babette de Jong, Patrick van Hage, Mary Ann Rhiemus, Fjodor van Steenis, John van Noort, Thomas Schmidt, Marcel J M Schaaf

Abstract read
In one paragraph

Article in Disease models & mechanisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Radoslaw J GoraAnimal Sciences and Health Cluster, Institute of Biology, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands.ORCID 0000-0002-3677-066X
Babette de JongBiological, Soft and Complex Systems, Leiden Institute of Physics, Leiden University, Bohrweg 2, 2333 CA Leiden, The Netherlands.
Patrick van HageAnimal Sciences and Health Cluster, Institute of Biology, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands.
Mary Ann RhiemusAnimal Sciences and Health Cluster, Institute of Biology, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands.
Fjodor van SteenisAnimal Sciences and Health Cluster, Institute of Biology, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands.
John van NoortBiological, Soft and Complex Systems, Leiden Institute of Physics, Leiden University, Bohrweg 2, 2333 CA Leiden, The Netherlands.ORCID 0000-0002-9094-5598
Thomas SchmidtBiological, Soft and Complex Systems, Leiden Institute of Physics, Leiden University, Bohrweg 2, 2333 CA Leiden, The Netherlands.ORCID 0000-0002-0045-1851
Marcel J M SchaafAnimal Sciences and Health Cluster, Institute of Biology, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands.ORCID 0000-0002-5859-8936

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Developments in single-molecule microscopy (SMM) have enabled imaging individual proteins in biological systems, focusing on the analysis of protein mobility patterns inside cultured cells. In the present study, SMM was applied in vivo, using the zebrafish embryo model. We studied dynamics of the membrane protein H-Ras, its membrane-anchoring domain, C10H-Ras, and mutants, using total internal reflection fluorescence microscopy. Our results consistently confirm the presence of fast- and slow-diffusing subpopulations of molecules, which confine to microdomains within the plasma membrane. The active mutant H-RasV12 exhibits higher diffusion rates and is confined to larger domains than the wild-type H-Ras and its inactive mutant H-RasN17. Subsequently, we demonstrate that the structure and composition of the plasma membrane have an imperative role in modulating H-Ras mobility patterns. Ultimately, we establish that differences between cells within the same embryo largely contribute to the overall data variability. Our findings agree with a model in which the cell architecture and the protein activation state determine protein mobility, underlining the importance of SMM imaging for studying factors influencing protein dynamics in an intact living organism. This article has an associated First Person interview with the first author of the paper.

Indexed as

Epidermal CellsMembrane ProteinsZebrafishAnimalsCell LineCell MembraneDiffusionProto-Oncogene Proteins p21(ras)Single Molecule ImagingMembrane ProteinsProto-Oncogene Proteins p21(ras)DiffusionH-RasMembrane microdomainsSingle-molecule microscopyTotal internal reflection fluorescence microscopyZebrafish

Identifiers

PMID34927194
PMCPMC8891639

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.