Evidence map›Paper›PMID 34924983›Full record

ArticleFrontiers in computational neuroscience2021

Improving the Quantification of the Lateral Geniculate Nucleus in Magnetic Resonance Imaging Using a Novel 3D-Edge Enhancement Technique.

Mikhail Lipin, Jean Bennett, Gui-Shuang Ying, Yinxi Yu, Manzar Ashtari

Abstract read
In one paragraph

Article in Frontiers in computational neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mikhail LipinDepartment of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Jean BennettDepartment of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Gui-Shuang YingCenter for Preventative Ophthalmology and Biostatistics, Department of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Yinxi YuCenter for Preventative Ophthalmology and Biostatistics, Department of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Manzar AshtariDepartment of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.

Funding

Plasticity of the human visual system studied in response to retinal gene therapyR01EY025287 · NEI · UNIVERSITY OF PENNSYLVANIA · PI ASHTARI, MANZAR · 2016 to 2020
$2.4M
Longitudinal Neuroimaging of Leber's Congenital Amaurosis After Gene TherapyR21EY020662 · NEI · CHILDREN'S HOSP OF PHILADELPHIA · PI ASHTARI, MANZAR · 2011 to 2012
$440k
NEI NIH HHS R01 EY025287NEI NIH HHS R21 EY020662
6 · The paper itself

Abstract

The lateral geniculate nucleus (LGN) is a small, inhomogeneous structure that relays major sensory inputs from the retina to the visual cortex. LGN morphology has been intensively studied due to various retinal diseases, as well as in the context of normal brain development. However, many of the methods used for LGN structural evaluations have not adequately addressed the challenges presented by the suboptimal routine MRI imaging of this structure. Here, we propose a novel method of edge enhancement that allows for high reliability and accuracy with regard to LGN morphometry, using routine 3D-MRI imaging protocols. This new algorithm is based on modeling a small brain structure as a polyhedron with its faces, edges, and vertices fitted with one plane, the intersection of two planes, and the intersection of three planes, respectively. This algorithm dramatically increases the contrast-to-noise ratio between the LGN and its surrounding structures as well as doubling the original spatial resolution. To show the algorithm efficacy, two raters (MA and ML) measured LGN volumes bilaterally in 19 subjects using the edge-enhanced LGN extracted areas from the 3D-T1 weighted images. The averages of the left and right LGN volumes from the two raters were 175 ± 8 and 174 ± 9 mm

Indexed as

brain morphometryLGNMRInoise immunitypartial volume effectsegmentation

Identifiers

PMID34924983
PMCPMC8677828

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.