Evidence map›Paper›PMID 34921763›Full record

ArticleDevelopmental cell2022

piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development.

Eric Cornes, Loan Bourdon, Meetali Singh, Florian Mueller, Piergiuseppe Quarato, Erik Wernersson, Magda Bienko, Blaise Li, Germano Cecere

Open access · hybridAbstract read
In one paragraph

Article in Developmental cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 52 citations in OpenAlex.

  1. Programmed DNA elimination was present in the last common ancestor ofbioRxiv : the preprint server for biology · 2026
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  11. RNA Helicase A promotes small RNA biogenesis and sorting in germ cells.bioRxiv : the preprint server for biology · 2025
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  14. Analysis of crosslinking sites suggestsbioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Eric CornesMechanisms of Epigenetic Inheritance, Department of Developmental and Stem Cell Biology, Institut Pasteur, UMR 3738, CNRS, Paris 75015, France.
Loan BourdonMechanisms of Epigenetic Inheritance, Department of Developmental and Stem Cell Biology, Institut Pasteur, UMR 3738, CNRS, Paris 75015, France.
Meetali SinghMechanisms of Epigenetic Inheritance, Department of Developmental and Stem Cell Biology, Institut Pasteur, UMR 3738, CNRS, Paris 75015, France.
Florian MuellerImaging and Modeling Unit, Institut Pasteur, UMR 3691 CNRS, C3BI USR 3756 IP CNRS, Paris, France.
Piergiuseppe QuaratoMechanisms of Epigenetic Inheritance, Department of Developmental and Stem Cell Biology, Institut Pasteur, UMR 3738, CNRS, Paris 75015, France.
Erik WernerssonDivision of Genome Biology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm 17165, Sweden; Science for Life Laboratory, Tomtebodavägen 23A, Stockholm 17165, Sweden.
Magda BienkoDivision of Genome Biology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm 17165, Sweden; Science for Life Laboratory, Tomtebodavägen 23A, Stockholm 17165, Sweden.
Blaise LiMechanisms of Epigenetic Inheritance, Department of Developmental and Stem Cell Biology, Institut Pasteur, UMR 3738, CNRS, Paris 75015, France; Bioinformatics and Biostatistics Hub, Department of Computational Biology, Institut Pasteur, USR 3756, CNRS, Paris 75015, France.
Germano CecereMechanisms of Epigenetic Inheritance, Department of Developmental and Stem Cell Biology, Institut Pasteur, UMR 3738, CNRS, Paris 75015, France. Electronic address: germano.cecere@pasteur.fr.
Centre National de la Recherche Scientifique · FRBiologie du Développement et Cellules SouchesKarolinska Institutet · SE

Funding

European Research Council 679243
6 · The paper itself

Abstract

Eukaryotic genomes harbor invading transposable elements that are silenced by PIWI-interacting RNAs (piRNAs) to maintain genome integrity in animal germ cells. However, whether piRNAs also regulate endogenous gene expression programs remains unclear. Here, we show that C. elegans piRNAs trigger the transcriptional silencing of hundreds of spermatogenic genes during spermatogenesis, promoting sperm differentiation and function. This silencing signal requires piRNA-dependent small RNA biogenesis and loading into downstream nuclear effectors, which correlates with the dynamic reorganization of two distinct perinuclear biomolecular condensates present in germ cells. In addition, the silencing capacity of piRNAs is temporally counteracted by the Argonaute CSR-1, which targets and licenses spermatogenic gene transcription. The spatial and temporal overlap between these opposing small RNA pathways contributes to setting up the timing of the spermatogenic differentiation program. Thus, our work identifies a prominent role for piRNAs as direct regulators of endogenous transcriptional programs during germline development and gamete differentiation.

Indexed as

AnimalsArgonaute ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell DifferentiationDNA Transposable ElementsGene Expression Regulation, DevelopmentalGene SilencingGerm CellsMalePhosphoenolpyruvate Sugar Phosphotransferase SystemRNA InterferenceRNA, MessengerRNA, Small InterferingSpermatogenesisTranscription, GeneticArgonaute ProteinsCaenorhabditis elegans ProteinsCSR-1 protein, C elegansDNA Transposable ElementsHRDE-1 protein, C elegansphosphoenolpyruvate-sorbose phosphotransferasePhosphoenolpyruvate Sugar Phosphotransferase SystemRNA, MessengerRNA, Small InterferingC. elegansepigeneticsfertilitygerm granulesgermline developmentpiRNAsRNAismall RNAsspermatogenesistranscriptional silencing

Identifiers

PMID34921763
PMCPMC8796119
OpenAlexW4200135818

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.