Evidence map›Paper›PMID 34921016›Full record

ArticleCancer research2022

ASO-Based PKM Splice-Switching Therapy Inhibits Hepatocellular Carcinoma Growth.

Wai Kit Ma, Dillon M Voss, Juergen Scharner, Ana S H Costa, Kuan-Ting Lin, Hyun Yong Jeon, John E Wilkinson, Michaela Jackson, Frank Rigo, C Frank Bennett and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 1 synthesis or guideline pooled it, 112 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  5. TargetingGenes & development · 2026
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  9. Article
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  13. Advances in antisense oligonucleotide treatment for cancer.Japanese journal of clinical oncology · 2026
    Review
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33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Wai Kit MaCold Spring Harbor Laboratory, Cold Spring Harbor, New York.
Dillon M VossCold Spring Harbor Laboratory, Cold Spring Harbor, New York.
Juergen ScharnerCold Spring Harbor Laboratory, Cold Spring Harbor, New York.ORCID 0000-0002-1110-8688
Ana S H CostaCold Spring Harbor Laboratory, Cold Spring Harbor, New York.ORCID 0000-0001-8932-6370
Kuan-Ting LinCold Spring Harbor Laboratory, Cold Spring Harbor, New York.
Hyun Yong JeonCold Spring Harbor Laboratory, Cold Spring Harbor, New York.
John E WilkinsonUniversity of Michigan Medical School, Ann Arbor, Michigan.ORCID 0000-0001-9174-8556
Michaela JacksonIonis Pharmaceuticals, Carlsbad, California.
Frank RigoIonis Pharmaceuticals, Carlsbad, California.
C Frank BennettIonis Pharmaceuticals, Carlsbad, California.
Adrian R KrainerCold Spring Harbor Laboratory, Cold Spring Harbor, New York.
Cold Spring Harbor Laboratory · USIonis Pharmaceuticals (United States) · USRosatom (Russia) · RUUniversity of Michigan · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI Camila dos Santos · 1985 to 2026
$116.8M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008444 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 1992 to 2024
$12.6M
NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA045508NIGMS NIH HHS T32 GM008444
6 · The paper itself

Abstract

The M2 pyruvate kinase (PKM2) isoform is upregulated in most cancers and plays a crucial role in regulation of the Warburg effect, which is characterized by the preference for aerobic glycolysis over oxidative phosphorylation for energy metabolism. PKM2 is an alternative-splice isoform of the PKM gene and is a potential therapeutic target. Antisense oligonucleotides (ASO) that switch PKM splicing from the cancer-associated PKM2 to the PKM1 isoform have been shown to induce apoptosis in cultured glioblastoma cells when delivered by lipofection. Here, we explore the potential of ASO-based PKM splice switching as a targeted therapy for liver cancer. A more potent lead constrained-ethyl (cEt)/DNA ASO induced PKM splice switching and inhibited the growth of cultured hepatocellular carcinoma (HCC) cells. This PKM isoform switch increased pyruvate-kinase activity and altered glucose metabolism. In an orthotopic HCC xenograft mouse model, the lead ASO and a second ASO targeting a nonoverlapping site inhibited tumor growth. Finally, in a genetic HCC mouse model, a surrogate mouse-specific ASO induced Pkm splice switching and inhibited tumorigenesis, without observable toxicity. These results lay the groundwork for a potential ASO-based splicing therapy for HCC. SIGNIFICANCE: Antisense oligonucleotides are used to induce a change in PKM isoform usage in hepatocellular carcinoma, reversing the Warburg effect and inhibiting tumorigenesis.

Indexed as

Alternative SplicingCarcinoma, HepatocellularLiver NeoplasmsPyruvate KinaseAnimalsCarcinogenesisCell Line, TumorCell Transformation, NeoplasticGlycolysisHumansMiceOligonucleotides, AntisenseProtein IsoformsOligonucleotides, AntisenseProtein IsoformsPyruvate Kinase

Identifiers

PMID34921016
PMCPMC8898261
OpenAlexW4200168400

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.