Evidence map›Paper›PMID 34920116›Full record

ArticleClinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases2022

Zoonotic spill-over of SARS-CoV-2: mink-adapted virus in humans.

Lukasz Rabalski, Maciej Kosinski, Natalia Mazur-Panasiuk, Boguslaw Szewczyk, Krystyna Bienkowska-Szewczyk, Ravi Kant, Tarja Sironen, Krzysztof Pyrc, Maciej Grzybek

Abstract read
In one paragraph

Article in Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
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  8. Wild red foxes (One health (Amsterdam, Netherlands) · 2024
    Article
  9. Improving the ONE HEALTH approach: a lesson from SARS-CoV-2 pandemic.Journal of preventive medicine and hygiene · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. SARS-CoV-2 Monitoring on Mink Farms in Poland.Journal of veterinary research · 2022
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lukasz RabalskiFaculty of Biotechnology of University of Gdansk and Medical University of Gdansk, Gdańsk, Poland.
Maciej KosinskiFaculty of Biotechnology of University of Gdansk and Medical University of Gdansk, Gdańsk, Poland.
Natalia Mazur-PanasiukMałopolska Centre of Biotechnology, Jagiellonian University, Kraków, Poland.
Boguslaw SzewczykFaculty of Biotechnology of University of Gdansk and Medical University of Gdansk, Gdańsk, Poland.
Krystyna Bienkowska-SzewczykFaculty of Biotechnology of University of Gdansk and Medical University of Gdansk, Gdańsk, Poland.
Ravi KantDepartment of Virology, University of Helsinki, Helsinki, Finland.
Tarja SironenDepartment of Virology, University of Helsinki, Helsinki, Finland.
Krzysztof PyrcMałopolska Centre of Biotechnology, Jagiellonian University, Kraków, Poland. Electronic address: k.a.pyrc@uj.edu.pl.
Maciej GrzybekInstitute of Maritime and Tropical Medicine, Medical University of Gdańsk, Gdynia, Poland. Electronic address: maciej.grzybek@gumed.edu.pl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThis work aimed to analyse possible zoonotic spill-over of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). We report the spill-over of mink-adapted SARS-CoV-2 from farmed mink to humans after adaptation that lasted at least 3 months.

methodsNext-generation sequencing and a bioinformatic approach were applied to analyse the data.

resultsIn an isolate obtained from an asymptomatic patient testing positive for SARS-CoV-2, we found four distinguishing mutations in the S gene that gave rise to the mink-adapted variant (G75V, M177T, Y453F, and C1247F) and others.

conclusionsZoonotic spill-over of SARS-CoV-2 can occur from mink to human.

Indexed as

COVID-19SARS-CoV-2AnimalsFarmsHumansMinkZoonosesMinkSARS-CoV-2Spill-overTransmissionZoonoses

Identifiers

PMID34920116
PMCPMC8673923

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.